RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 LRRC24Q50LG9 513 aa11.73□□□□□ -0.53
COL1A1-210ENST00000504289 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
COL1A1-210ENST00000504289 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 MROH5Q6ZUA9 1318 aa11.73□□□□□ -0.53
COL1A1-210ENST00000504289 BCL9LQ86UU0 1499 aa11.73□□□□□ -0.53
COL1A1-210ENST00000504289 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 UPF3BQ9BZI7 483 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
COL1A1-210ENST00000504289 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 ITGA6P23229 1130 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 AK2P54819 239 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 TIMM10P62072 90 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
COL1A1-210ENST00000504289 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
COL1A1-210ENST00000504289 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 UQCRFS1P1P0C7P4 283 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
COL1A1-210ENST00000504289 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-210ENST00000504289 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-210ENST00000504289 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
COL1A1-210ENST00000504289 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
COL1A1-210ENST00000504289 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
COL1A1-210ENST00000504289 LRP5O75197 1615 aa11.71□□□□□ -0.54
COL1A1-210ENST00000504289 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-210ENST00000504289 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 GOLIM4O00461 696 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 PDE8BO95263 885 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 PDCP20941 246 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 RPS6KB1P23443 525 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 GPTP24298 496 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 ARXQ96QS3 562 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL1A1-210ENST00000504289 GREM2Q9H772 168 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 CTNNA3Q9UI47 895 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 ZDHHC9Q9Y397 364 aa11.7□□□□□ -0.54
COL1A1-210ENST00000504289 RIC1Q4ADV7 1423 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 MBD3O95983 291 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 ITPK1Q13572 414 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 PUM3Q15397 648 aaKnown RBP11.69□□□□□ -0.54
COL1A1-210ENST00000504289 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
COL1A1-210ENST00000504289 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-210ENST00000504289 FBXL16Q8N461 479 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 LPIN2Q92539 896 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 CNNM1Q9NRU3 951 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 SMC3Q9UQE7 1217 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 LAMB2P55268 1798 aa11.69□□□□□ -0.54
COL1A1-210ENST00000504289 GOLGA6L3A6NEY3 463 aa11.68□□□□□ -0.54
COL1A1-210ENST00000504289 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-210ENST00000504289 ADCK5Q3MIX3 580 aa11.68□□□□□ -0.54
COL1A1-210ENST00000504289 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
COL1A1-210ENST00000504289 THSD7AQ9UPZ6 1657 aa11.68□□□□□ -0.54
COL1A1-210ENST00000504289 MYH14Q7Z406 1995 aaKnown RBP11.67□□□□□ -0.54
COL1A1-210ENST00000504289 ZBTB22O15209 634 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-210ENST00000504289 NTSR2O95665 410 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 FGFR2P21802 821 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 MRE11P49959 708 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
COL1A1-210ENST00000504289 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 APPBP2Q92624 585 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
COL1A1-210ENST00000504289 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
COL1A1-210ENST00000504289 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 BCORQ6W2J9 1755 aa11.67□□□□□ -0.54
COL1A1-210ENST00000504289 IGSF3O75054 1194 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-210ENST00000504289 SLC5A1P13866 664 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
COL1A1-210ENST00000504289 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 MCTP1Q6DN14 999 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-210ENST00000504289 TMEM87AQ8NBN3 555 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 C8orf37Q96NL8 207 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 AGXT2Q9BYV1 514 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL1A1-210ENST00000504289 DDX49Q9Y6V7 483 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms