RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 PLAURQ03405 335 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 EHHADHQ08426 723 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 ZNF438Q7Z4V0 828 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 GJD3Q8N144 294 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 TRPM4Q8TD43 1214 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 MKL2Q9ULH7 1088 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 SLC6A14Q9UN76 642 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 GPR182O15218 404 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 MMP20O60882 483 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 GPLD1P80108 840 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 FAM129BQ96TA1 746 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC13-205ENST00000504243 NEFLP07196 543 aa8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 HOXD8P13378 290 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 OR13H1Q8NG92 308 aa8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 ELP3Q9H9T3 547 aa8.2□□□□□ -1.1
TRAPPC13-205ENST00000504243 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
TRAPPC13-205ENST00000504243 DGKGP49619 791 aa8.19□□□□□ -1.1
TRAPPC13-205ENST00000504243 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
TRAPPC13-205ENST00000504243 FAM35AQ86V20 835 aa8.19□□□□□ -1.1
TRAPPC13-205ENST00000504243 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
TRAPPC13-205ENST00000504243 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 UNCXA6NJT0 531 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 FBXO33Q7Z6M2 555 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 RBSNQ9H1K0 784 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 PRDM6Q9NQX0 595 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 FRRS1LQ9P0K9 344 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
TRAPPC13-205ENST00000504243 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 M0R082 166 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 GNB5O14775 395 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 SIK1P57059 783 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 FMR1Q06787 632 aaKnown RBP eCLIP8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 DSC3Q14574 896 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 ZNF417Q8TAU3 575 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 ZNF587Q96SQ5 575 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
TRAPPC13-205ENST00000504243 LILRB5O75023 590 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 RGS9O75916 674 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 GHRHP01286 108 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 ALBP02768 609 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 CPB1P15086 417 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 FGD1P98174 961 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 MLLT1Q03111 559 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 HYAL2Q12891 473 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 ORC1Q13415 861 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 PSAPL1Q6NUJ1 521 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 ELMSAN1Q6PJG2 1045 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 ALKBH8Q96BT7 664 aaKnown RBP8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 WWC3Q9ULE0 1092 aa8.16□□□□□ -1.1
TRAPPC13-205ENST00000504243 EIF2AK2P19525 551 aaKnown RBP8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 TTC9Q92623 222 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 SPACA7Q96KW9 195 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 CSRNP1Q96S65 589 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 MRS2Q9HD23 443 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 JPH1Q9HDC5 661 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
TRAPPC13-205ENST00000504243 SPDYE3A6NKU9 549 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 EIF1AYO14602 144 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 PHACTR2O75167 634 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 IGHA2P01877 340 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 HFE2Q6ZVN8 426 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 NSUN5Q96P11 429 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 DUSP9Q99956 384 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 FOXD3Q9UJU5 478 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-205ENST00000504243 CPNE3O75131 537 aaKnown RBP8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 TNFRSF21O75509 655 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 KIF4AO95239 1232 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 CES1P23141 567 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 IRS1P35568 1242 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 ALG1LQ6GMV1 187 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 CNTN3Q9P232 1028 aa8.13□□□□□ -1.11
TRAPPC13-205ENST00000504243 J3QW42 95 aa8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 PSMD2Q13200 908 aa8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 C1orf127Q8N9H9 656 aa8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms