RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 ZNF827Q17R98 1081 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 AMIGO3Q86WK7 504 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
KLHL3-204ENST00000504208 ARXQ96QS3 562 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 IL25Q9H293 177 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
KLHL3-204ENST00000504208 BOLA2Q9H3K6 86 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
KLHL3-204ENST00000504208 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
KLHL3-204ENST00000504208 RPS6KA4O75676 772 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 PHF14O94880 888 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
KLHL3-204ENST00000504208 VPS53Q5VIR6 699 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 DZIP3Q86Y13 1208 aaKnown RBP11.46□□□□□ -0.57
KLHL3-204ENST00000504208 TTC14Q96N46 770 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
KLHL3-204ENST00000504208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.57
KLHL3-204ENST00000504208 MED23Q9ULK4 1368 aa11.46□□□□□ -0.57
KLHL3-204ENST00000504208 TRAK2O60296 914 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
KLHL3-204ENST00000504208 IFIT5Q13325 482 aaKnown RBP11.45□□□□□ -0.58
KLHL3-204ENST00000504208 KRT32Q14532 448 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 KBTBD3Q8NAB2 608 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
KLHL3-204ENST00000504208 LIMCH1Q9UPQ0 1083 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 PARP10Q53GL7 1025 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 DBNDD2Q9BQY9 259 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
KLHL3-204ENST00000504208 SH2B1Q9NRF2 756 aaPredicted RBP11.45□□□□□ -0.58
KLHL3-204ENST00000504208 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
KLHL3-204ENST00000504208 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 PDE8AO60658 829 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 CAMTA2O94983 1202 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 SSFA2P28290 1259 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 ANKRD1Q15327 319 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 ZNF512BQ96KM6 892 aaPredicted RBP11.44□□□□□ -0.58
KLHL3-204ENST00000504208 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.44□□□□□ -0.58
KLHL3-204ENST00000504208 CYP46A1Q9Y6A2 500 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 ZNF609O15014 1411 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
KLHL3-204ENST00000504208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
KLHL3-204ENST00000504208 TAF5LO75529 589 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
KLHL3-204ENST00000504208 PTH1RQ03431 593 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
KLHL3-204ENST00000504208 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 RUFY3Q7L099 469 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 TFCP2L1Q9NZI6 479 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 RBM8AQ9Y5S9 174 aaKnown RBP11.43□□□□□ -0.58
KLHL3-204ENST00000504208 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
KLHL3-204ENST00000504208 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
KLHL3-204ENST00000504208 A0A1B0GUL7 405 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 ZFYP08048 801 aaPredicted RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 KCNJ4P48050 445 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 CTSWP56202 376 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 HLFQ16534 295 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 PRPF40BQ6NWY9 871 aaKnown RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 FAM227BQ96M60 508 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 UPF3BQ9BZI7 483 aaKnown RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 PAG1Q9NWQ8 432 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 STK32BQ9NY57 414 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 ZNF652Q9Y2D9 606 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 TNRC6CQ9HCJ0 1690 aaKnown RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 RPAP1Q9BWH6 1393 aaPredicted RBP11.42□□□□□ -0.58
KLHL3-204ENST00000504208 AK9Q5TCS8 1911 aa11.42□□□□□ -0.58
KLHL3-204ENST00000504208 A0A0D9SFI3 127 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 IRS4O14654 1257 aaPredicted RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 BRD1O95696 1058 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 RFC4P35249 363 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 LRRC24Q50LG9 513 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 ZGPATQ8N5A5 531 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 NEUROD6Q96NK8 337 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 PDRG1Q9NUG6 133 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 PNPLA7Q6ZV29 1317 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 SLC27A2O14975 620 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 ZPR1O75312 459 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms