RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TRIM5Q9C035 493 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 RIOK3O14730 519 aaKnown RBP17.63■□□□□ 0.41
SNF8-203ENST00000504000 JAK2O60674 1132 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 SNRPA1P09661 255 aaKnown RBP17.63■□□□□ 0.41
SNF8-203ENST00000504000 TFCP2Q12800 502 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 STK3Q13188 491 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 ZSCAN25Q6NSZ9 544 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
SNF8-203ENST00000504000 FBXL16Q8N461 479 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 DSCC1Q9BVC3 393 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 DTNBO60941 627 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
SNF8-203ENST00000504000 RAPGEF4Q8WZA2 1011 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 MRFAP1L1Q96HT8 127 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 CHMP3Q9Y3E7 222 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 PAXBP1Q9Y5B6 917 aa17.63■□□□□ 0.41
SNF8-203ENST00000504000 KIF1AQ12756 1690 aa17.62■□□□□ 0.41
SNF8-203ENST00000504000 PHKG2P15735 406 aa17.62■□□□□ 0.41
SNF8-203ENST00000504000 SCRN1Q12765 414 aa17.62■□□□□ 0.41
SNF8-203ENST00000504000 IQCB1Q15051 598 aa17.62■□□□□ 0.41
SNF8-203ENST00000504000 CASP7P55210 303 aa17.61■□□□□ 0.41
SNF8-203ENST00000504000 EXOSC10Q01780 885 aaKnown RBP17.61■□□□□ 0.41
SNF8-203ENST00000504000 EDC3Q96F86 508 aaKnown RBP17.61■□□□□ 0.41
SNF8-203ENST00000504000 SMTNL1A8MU46 457 aa17.61■□□□□ 0.41
SNF8-203ENST00000504000 MYL6BP14649 208 aa17.61■□□□□ 0.41
SNF8-203ENST00000504000 UTP14CQ5TAP6 766 aaKnown RBP17.61■□□□□ 0.41
SNF8-203ENST00000504000 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
SNF8-203ENST00000504000 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
SNF8-203ENST00000504000 STX1AQ16623 288 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 DRC7Q8IY82 874 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
SNF8-203ENST00000504000 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
SNF8-203ENST00000504000 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 DNAJC25Q9H1X3 360 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 PRDM4Q9UKN5 801 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 MYH15Q9Y2K3 1946 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 SALL1Q9NSC2 1324 aa17.6■□□□□ 0.41
SNF8-203ENST00000504000 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
SNF8-203ENST00000504000 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
SNF8-203ENST00000504000 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
SNF8-203ENST00000504000 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 PDCL2Q8N4E4 241 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 RGS22Q8NE09 1264 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 SPEF2Q9C093 1822 aa17.59■□□□□ 0.41
SNF8-203ENST00000504000 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 EVCP57679 992 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 KCND1Q9NSA2 647 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.41
SNF8-203ENST00000504000 UBE3BQ7Z3V4 1068 aa17.58■□□□□ 0.4
SNF8-203ENST00000504000 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
SNF8-203ENST00000504000 ENGASEQ8NFI3 743 aa17.58■□□□□ 0.4
SNF8-203ENST00000504000 TSC1Q92574 1164 aa17.58■□□□□ 0.4
SNF8-203ENST00000504000 FEZ1Q99689 392 aa17.58■□□□□ 0.4
SNF8-203ENST00000504000 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
SNF8-203ENST00000504000 SNW1Q13573 536 aaKnown RBP17.57■□□□□ 0.4
SNF8-203ENST00000504000 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
SNF8-203ENST00000504000 STOX1Q6ZVD7 989 aa17.57■□□□□ 0.4
SNF8-203ENST00000504000 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
SNF8-203ENST00000504000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNF8-203ENST00000504000 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
SNF8-203ENST00000504000 ANO10Q9NW15 660 aa17.57■□□□□ 0.4
SNF8-203ENST00000504000 ALS2Q96Q42 1657 aa17.57■□□□□ 0.4
SNF8-203ENST00000504000 A0A087WZG4 1122 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 H7C1W4 665 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 FGD1P98174 961 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 FAM160A1Q05DH4 1040 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 CCDC73Q6ZRK6 1079 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 LRRC8AQ8IWT6 810 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 CCAR1Q8IX12 1150 aaKnown RBP17.56■□□□□ 0.4
SNF8-203ENST00000504000 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
SNF8-203ENST00000504000 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
SNF8-203ENST00000504000 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
SNF8-203ENST00000504000 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 LRMPQ12912 555 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
SNF8-203ENST00000504000 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
SNF8-203ENST00000504000 TNNT1P13805 278 aa17.55■□□□□ 0.4
SNF8-203ENST00000504000 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
SNF8-203ENST00000504000 DDX11Q96FC9 970 aa17.55■□□□□ 0.4
SNF8-203ENST00000504000 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 KINO60870 393 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 FOXO4P98177 505 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms