RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 HSPA1AP0DMV8 641 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 HSPA1BP0DMV9 641 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 DNAAF4Q8WXU2 420 aa24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 CDC5LQ99459 802 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 PODXL2Q9NZ53 605 aa24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 GGA1Q9UJY5 639 aa24.84■■□□□ 1.57
UBE2D3-215ENST00000503418 PSMD14O00487 310 aa24.83■■□□□ 1.57
UBE2D3-215ENST00000503418 IFFO2Q5TF58 517 aa24.83■■□□□ 1.57
UBE2D3-215ENST00000503418 TTLL11Q8NHH1 800 aa24.83■■□□□ 1.57
UBE2D3-215ENST00000503418 ZC3H12CQ9C0D7 883 aaKnown RBP24.83■■□□□ 1.57
UBE2D3-215ENST00000503418 ZBTB12Q9Y330 459 aaPredicted RBP24.83■■□□□ 1.57
UBE2D3-215ENST00000503418 G3V3G9 751 aa24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 FMR1Q06787 632 aaKnown RBP eCLIP24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 GCKRQ14397 625 aa24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 DCAF8Q5TAQ9 597 aa24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 TRPM7Q96QT4 1865 aa24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 GREM2Q9H772 168 aa24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 CNOT7Q9UIV1 285 aaKnown RBP24.82■■□□□ 1.56
UBE2D3-215ENST00000503418 SHTN1A0MZ66 631 aa24.81■■□□□ 1.56
UBE2D3-215ENST00000503418 H7C1W4 665 aa24.81■■□□□ 1.56
UBE2D3-215ENST00000503418 MICALL2Q8IY33 904 aa24.81■■□□□ 1.56
UBE2D3-215ENST00000503418 ABT1Q9ULW3 272 aaKnown RBP24.81■■□□□ 1.56
UBE2D3-215ENST00000503418 H7C1D1 291 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 TRAF5O00463 557 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 LINS1Q8NG48 757 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 TRPM4Q8TD43 1214 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 KCNQ5Q9NR82 932 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 XDHP47989 1333 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 SCN9AQ15858 1988 aa24.8■■□□□ 1.56
UBE2D3-215ENST00000503418 RTL9Q8NET4 1388 aa24.79■■□□□ 1.56
UBE2D3-215ENST00000503418 VEGFBP49765 207 aa24.78■■□□□ 1.56
UBE2D3-215ENST00000503418 F6X3S4 739 aa24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 ATP2B4P23634 1241 aa24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 HIRAP54198 1017 aaPredicted RBP24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 DEFB115Q30KQ5 88 aa24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 DPF2Q92785 391 aa24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 BSDC1Q9NW68 430 aaPredicted RBP24.77■■□□□ 1.56
UBE2D3-215ENST00000503418 GLIS2Q9BZE0 524 aaPredicted RBP24.76■■□□□ 1.55
UBE2D3-215ENST00000503418 RASSF10A6NK89 507 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 RPS12P25398 132 aaKnown RBP24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 IGHMBP2P38935 993 aaKnown RBP24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 CASP7P55210 303 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 FAM161AQ3B820 660 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 COL13A1Q5TAT6 717 aaPredicted RBP24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 SAMD7Q7Z3H4 446 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 PLA2G12BQ9BX93 195 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 MINPP1Q9UNW1 487 aa24.75■■□□□ 1.55
UBE2D3-215ENST00000503418 ITGA6P23229 1130 aa24.74■■□□□ 1.55
UBE2D3-215ENST00000503418 TBC1D10BQ4KMP7 808 aaPredicted RBP24.74■■□□□ 1.55
UBE2D3-215ENST00000503418 ZC3H15Q8WU90 426 aaKnown RBP24.74■■□□□ 1.55
UBE2D3-215ENST00000503418 PGAP2Q9UHJ9 254 aa24.74■■□□□ 1.55
UBE2D3-215ENST00000503418 PSME4Q14997 1843 aa24.73■■□□□ 1.55
UBE2D3-215ENST00000503418 ZNF521Q96K83 1311 aa24.73■■□□□ 1.55
UBE2D3-215ENST00000503418 CST9Q5W186 159 aa24.73■■□□□ 1.55
UBE2D3-215ENST00000503418 PAXIP1Q6ZW49 1069 aaPredicted RBP24.73■■□□□ 1.55
UBE2D3-215ENST00000503418 VIL1P09327 827 aaKnown RBP24.72■■□□□ 1.55
UBE2D3-215ENST00000503418 BEND3Q5T5X7 828 aa24.72■■□□□ 1.55
UBE2D3-215ENST00000503418 RBM26Q5T8P6 1007 aaKnown RBP24.72■■□□□ 1.55
UBE2D3-215ENST00000503418 WTIPA6NIX2 430 aaPredicted RBP24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 CELF2O95319 508 aaKnown RBP24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 EGFRP00533 1210 aa24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 CDC37L1Q7L3B6 337 aa24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 MPHOSPH8Q99549 860 aa24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 ZNF408Q9H9D4 720 aa24.71■■□□□ 1.55
UBE2D3-215ENST00000503418 WDR33Q9C0J8 1336 aaKnown RBP24.7■■□□□ 1.54
UBE2D3-215ENST00000503418 CSF1RP07333 972 aa24.7■■□□□ 1.54
UBE2D3-215ENST00000503418 CCT4P50991 539 aaKnown RBP24.7■■□□□ 1.54
UBE2D3-215ENST00000503418 MED23Q9ULK4 1368 aa24.69■■□□□ 1.54
UBE2D3-215ENST00000503418 GRM1Q13255 1194 aa24.69■■□□□ 1.54
UBE2D3-215ENST00000503418 SLC4A10Q6U841 1118 aa24.69■■□□□ 1.54
UBE2D3-215ENST00000503418 CHMP3Q9Y3E7 222 aa24.69■■□□□ 1.54
UBE2D3-215ENST00000503418 POLR2AP24928 1970 aaKnown RBP24.69■■□□□ 1.54
UBE2D3-215ENST00000503418 KIF4BQ2VIQ3 1234 aa24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 RSBN1LQ6PCB5 846 aaPredicted RBP24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 PODNQ7Z5L7 613 aa24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 USP48Q86UV5 1035 aa24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 AIDAQ96BJ3 306 aa24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 TLL2Q9Y6L7 1015 aa24.68■■□□□ 1.54
UBE2D3-215ENST00000503418 ANKRD18BA2A2Z9 1011 aa24.67■■□□□ 1.54
UBE2D3-215ENST00000503418 CYP4F22Q6NT55 531 aa24.67■■□□□ 1.54
UBE2D3-215ENST00000503418 LEMD3Q9Y2U8 911 aa24.67■■□□□ 1.54
UBE2D3-215ENST00000503418 USP17L3A6NCW0 530 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 USP17L4A6NCW7 530 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 FOXN1O15353 648 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 FOXO4P98177 505 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 USP17L1Q7RTZ2 530 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 AGBL3Q8NEM8 1001 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 CAPNS2Q96L46 248 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 ANKRD2Q9GZV1 360 aa24.66■■□□□ 1.54
UBE2D3-215ENST00000503418 E9PSI1 815 aa24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 GRM8O00222 908 aa24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 ECE1P42892 770 aa24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 IFIT5Q13325 482 aaKnown RBP24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 KRT26Q7Z3Y9 468 aa24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 FBXW7Q969H0 707 aa24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 DCPSQ96C86 337 aaKnown RBP24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 C9orf78Q9NZ63 289 aaPredicted RBP24.65■■□□□ 1.54
UBE2D3-215ENST00000503418 ZNF804BA4D1E1 1349 aa24.64■■□□□ 1.54
UBE2D3-215ENST00000503418 KCNJ4P48050 445 aa24.64■■□□□ 1.54
UBE2D3-215ENST00000503418 CHRNDQ07001 517 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms