RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 SCN9AQ15858 1988 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
DDR1-247ENST00000502955 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
DDR1-247ENST00000502955 DLK2Q6UY11 383 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 C2orf69Q8N8R5 385 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 CCDC102AQ96A19 550 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 ZNF428Q96B54 188 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 KCNQ5Q9NR82 932 aa17.86■□□□□ 0.45
DDR1-247ENST00000502955 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
DDR1-247ENST00000502955 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
DDR1-247ENST00000502955 DGKZQ13574 1117 aa17.85■□□□□ 0.45
DDR1-247ENST00000502955 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
DDR1-247ENST00000502955 PSME4Q14997 1843 aa17.84■□□□□ 0.45
DDR1-247ENST00000502955 TNRC18O15417 2968 aaPredicted RBP17.84■□□□□ 0.45
DDR1-247ENST00000502955 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
DDR1-247ENST00000502955 DOK7Q18PE1 504 aa17.84■□□□□ 0.45
DDR1-247ENST00000502955 KIF4BQ2VIQ3 1234 aa17.84■□□□□ 0.45
DDR1-247ENST00000502955 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
DDR1-247ENST00000502955 ZC3H12CQ9C0D7 883 aaKnown RBP17.84■□□□□ 0.45
DDR1-247ENST00000502955 ADM5C9JUS6 153 aa17.83■□□□□ 0.44
DDR1-247ENST00000502955 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
DDR1-247ENST00000502955 SLC10A3P09131 477 aa17.82■□□□□ 0.44
DDR1-247ENST00000502955 ZNF157P51786 506 aaPredicted RBP17.82■□□□□ 0.44
DDR1-247ENST00000502955 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
DDR1-247ENST00000502955 RBM26Q5T8P6 1007 aaKnown RBP17.82■□□□□ 0.44
DDR1-247ENST00000502955 SULF1Q8IWU6 871 aa17.82■□□□□ 0.44
DDR1-247ENST00000502955 MBIPQ9NS73 344 aa17.82■□□□□ 0.44
DDR1-247ENST00000502955 GGA3Q9NZ52 723 aa17.82■□□□□ 0.44
DDR1-247ENST00000502955 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
DDR1-247ENST00000502955 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
DDR1-247ENST00000502955 KIF23Q02241 960 aaPredicted RBP17.81■□□□□ 0.44
DDR1-247ENST00000502955 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDR1-247ENST00000502955 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
DDR1-247ENST00000502955 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
DDR1-247ENST00000502955 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
DDR1-247ENST00000502955 UFL1O94874 794 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
DDR1-247ENST00000502955 SEC31BQ9NQW1 1179 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 RNF186Q9NXI6 227 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
DDR1-247ENST00000502955 PDE8AO60658 829 aa17.79■□□□□ 0.44
DDR1-247ENST00000502955 PCCAP05165 728 aaPredicted RBP17.79■□□□□ 0.44
DDR1-247ENST00000502955 FKBP1BP68106 108 aa17.79■□□□□ 0.44
DDR1-247ENST00000502955 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
DDR1-247ENST00000502955 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
DDR1-247ENST00000502955 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
DDR1-247ENST00000502955 CSRNP1Q96S65 589 aa17.78■□□□□ 0.44
DDR1-247ENST00000502955 GMLQ99445 158 aa17.78■□□□□ 0.44
DDR1-247ENST00000502955 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
DDR1-247ENST00000502955 PAPPA2Q9BXP8 1791 aa17.78■□□□□ 0.44
DDR1-247ENST00000502955 ASTN2O75129 1339 aaPredicted RBP17.77■□□□□ 0.44
DDR1-247ENST00000502955 XDHP47989 1333 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 G3V3G9 751 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 TRPA1O75762 1119 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 SCARF1Q14162 830 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 DCAF8Q5TAQ9 597 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 ANGEL2Q5VTE6 544 aaKnown RBP17.77■□□□□ 0.44
DDR1-247ENST00000502955 MYD88Q99836 296 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
DDR1-247ENST00000502955 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
DDR1-247ENST00000502955 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
DDR1-247ENST00000502955 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
DDR1-247ENST00000502955 USP17L8P0C7I0 530 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 ATP2B4P23634 1241 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 GNAI1P63096 354 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 CALD1Q05682 793 aaKnown RBP17.75■□□□□ 0.43
DDR1-247ENST00000502955 RASAL3Q86YV0 1011 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 ANKRD18AQ8IVF6 992 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
DDR1-247ENST00000502955 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
DDR1-247ENST00000502955 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
DDR1-247ENST00000502955 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
DDR1-247ENST00000502955 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
DDR1-247ENST00000502955 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
DDR1-247ENST00000502955 DDX58O95786 925 aaKnown RBP17.73■□□□□ 0.43
DDR1-247ENST00000502955 DDX10Q13206 875 aaKnown RBP17.73■□□□□ 0.43
DDR1-247ENST00000502955 MED23Q9ULK4 1368 aa17.73■□□□□ 0.43
DDR1-247ENST00000502955 MYH3P11055 1940 aa17.72■□□□□ 0.43
DDR1-247ENST00000502955 CTU1Q7Z7A3 348 aaKnown RBP17.72■□□□□ 0.43
DDR1-247ENST00000502955 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
DDR1-247ENST00000502955 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
DDR1-247ENST00000502955 MMP14P50281 582 aa17.71■□□□□ 0.43
DDR1-247ENST00000502955 CTSWP56202 376 aa17.71■□□□□ 0.43
DDR1-247ENST00000502955 CCDC30Q5VVM6 783 aa17.71■□□□□ 0.43
DDR1-247ENST00000502955 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
DDR1-247ENST00000502955 APAF1O14727 1248 aa17.7■□□□□ 0.42
DDR1-247ENST00000502955 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
DDR1-247ENST00000502955 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
DDR1-247ENST00000502955 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
DDR1-247ENST00000502955 CCDC85AQ96PX6 553 aaPredicted RBP17.7■□□□□ 0.42
DDR1-247ENST00000502955 MINPP1Q9UNW1 487 aa17.7■□□□□ 0.42
DDR1-247ENST00000502955 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
DDR1-247ENST00000502955 DACT2Q5SW24 774 aa17.69■□□□□ 0.42
DDR1-247ENST00000502955 KSR2Q6VAB6 950 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms