RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 MICALL2Q8IY33 904 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 C2orf69Q8N8R5 385 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 FAM89AQ96GI7 184 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 PITPNM2Q9BZ72 1349 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 TRAF5O00463 557 aa9.24□□□□□ -0.93
SH3RF1-202ENST00000502315 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
SH3RF1-202ENST00000502315 TBC1D16Q8TBP0 767 aa9.24□□□□□ -0.93
SH3RF1-202ENST00000502315 POLLQ9UGP5 575 aa9.24□□□□□ -0.93
SH3RF1-202ENST00000502315 G3V3G9 751 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 PSMD14O00487 310 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 ZNF280AP59817 542 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 CCDC27Q2M243 656 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 PAXIP1Q6ZW49 1069 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 KRT26Q7Z3Y9 468 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 CELF1Q92879 486 aaKnown RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 CDC5LQ99459 802 aaKnown RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 METTL22Q9BUU2 404 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 GLIS2Q9BZE0 524 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 PRKRIP1Q9H875 184 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 GGA1Q9UJY5 639 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 RTL9Q8NET4 1388 aa9.23□□□□□ -0.93
SH3RF1-202ENST00000502315 LAMB2P55268 1798 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 ECE2O60344 883 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 HUNKP57058 714 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 GPSM2P81274 684 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 RGMBQ6NW40 437 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 GBA2Q9HCG7 927 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 BSDC1Q9NW68 430 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 ANKIB1Q9P2G1 1089 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 XDHP47989 1333 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 MYO3BQ8WXR4 1341 aa9.22□□□□□ -0.93
SH3RF1-202ENST00000502315 DUOX1Q9NRD9 1551 aa9.21□□□□□ -0.93
SH3RF1-202ENST00000502315 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 KRT24Q2M2I5 525 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 RSBN1LQ6PCB5 846 aaPredicted RBP9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 USP48Q86UV5 1035 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 ANKRD18AQ8IVF6 992 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 CCDC146Q8IYE0 955 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 DBNDD1Q9H9R9 158 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 IL16Q14005 1332 aa9.21□□□□□ -0.94
SH3RF1-202ENST00000502315 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 UNCXA6NJT0 531 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 FAM155AB1AL88 458 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 PKN2Q16513 984 aaKnown RBP9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 GMLQ99445 158 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-202ENST00000502315 HAX1O00165 279 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 PITPNM1O00562 1244 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 APAF1O14727 1248 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 RIMBP2O15034 1052 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 AOC2O75106 756 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 UFL1O94874 794 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 STRIP1Q5VSL9 837 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 MYD88Q99836 296 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 PLA2G12BQ9BX93 195 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 COA1Q9GZY4 146 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
SH3RF1-202ENST00000502315 SLC10A3P09131 477 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 CTSWP56202 376 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 DOK7Q18PE1 504 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 TBC1D10BQ4KMP7 808 aaPredicted RBP9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 ANKRD2Q9GZV1 360 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 MINPP1Q9UNW1 487 aa9.18□□□□□ -0.94
SH3RF1-202ENST00000502315 CCDC85CA6NKD9 419 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 H7C1W4 665 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 NF2P35240 595 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 FXR2P51116 673 aaKnown RBP eCLIP9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 INHBEP58166 350 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 EVX2Q03828 476 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms