RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
HMGXB4-208ENST00000498325 NAIPQ13075 1403 aa7.68□□□□□ -1.18
HMGXB4-208ENST00000498325 PLEKHH2Q8IVE3 1493 aa7.68□□□□□ -1.18
HMGXB4-208ENST00000498325 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 SMTNP53814 917 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 SLFNL1Q499Z3 407 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 SYT9Q86SS6 491 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 PHTF2Q8N3S3 785 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 STRN4Q9NRL3 753 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 RRP7BPQ9NSQ0 103 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 ZDHHC3Q9NYG2 299 aa7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 SCAF11Q99590 1463 aaKnown RBP7.67□□□□□ -1.18
HMGXB4-208ENST00000498325 KCNA6P17658 529 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 TRIM28Q13263 835 aaKnown RBP7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 TXNDC2Q86VQ3 553 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 ANKRD30AQ9BXX3 1397 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 SYCP2Q9BX26 1530 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 ARHGEF5Q12774 1597 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 INO80Q9ULG1 1556 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 GCC2Q8IWJ2 1684 aa7.66□□□□□ -1.18
HMGXB4-208ENST00000498325 M0R082 166 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 SHPRHQ149N8 1683 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 ZNF295-AS1Q8N0V1 137 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 ADGBQ8N7X0 1667 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 ZNF417Q8TAU3 575 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 BCANQ96GW7 911 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 C8orf37Q96NL8 207 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 ZNF587Q96SQ5 575 aaPredicted RBP7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 KIAA1107Q9UPP5 1409 aa7.65□□□□□ -1.18
HMGXB4-208ENST00000498325 PRDM15P57071 1507 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 ADGRL2O95490 1459 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 WASHC2CQ9Y4E1 1318 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 EFSO43281 561 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 BICDL1Q6ZP65 573 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 DEFB132Q7Z7B7 95 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 CABP1Q9NZU7 370 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
HMGXB4-208ENST00000498325 CROCC2H7BZ55 1655 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 DIP2AQ14689 1571 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 CCDC141Q6ZP82 1450 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 ARHGAP23Q9P227 1491 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 MSH6P52701 1360 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 BTBD11A6QL63 1104 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 KIF3BO15066 747 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 SIN3BO75182 1162 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 LRP8Q14114 963 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 GRIK4Q16099 956 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 NGLY1Q96IV0 654 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 MDFIQ99750 246 aa7.63□□□□□ -1.19
HMGXB4-208ENST00000498325 MBD5Q9P267 1494 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 EP400Q96L91 3159 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 COL9A3Q14050 684 aaPredicted RBP7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 SLC26A8Q96RN1 970 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 PRDM6Q9NQX0 595 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 SNRKQ9NRH2 765 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 AHDC1Q5TGY3 1603 aaPredicted RBP7.62□□□□□ -1.19
HMGXB4-208ENST00000498325 DHX29Q7Z478 1369 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 NHSL1Q5SYE7 1610 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 A6NJY4 79 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 ADARB2-AS1A8MUL3 147 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 IQSEC3Q9UPP2 1182 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 NWD1Q149M9 1564 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 SLIT1O75093 1534 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 BCL9LQ86UU0 1499 aa7.61□□□□□ -1.19
HMGXB4-208ENST00000498325 MAST1Q9Y2H9 1570 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 ALBP02768 609 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 H2AFB1P0C5Y9 115 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 H2AFB2P0C5Z0 115 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 MICALL1Q8N3F8 863 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 IL27Q8NEV9 243 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 SLC4A9Q96Q91 983 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 MPHOSPH9Q99550 1183 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 STARD13Q9Y3M8 1113 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 UBR1Q8IWV7 1749 aa7.6□□□□□ -1.19
HMGXB4-208ENST00000498325 C9orf172C9J069 976 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 MTFR1Q15390 333 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 PARP3Q9Y6F1 533 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 ANKRD50Q9ULJ7 1429 aa7.59□□□□□ -1.19
HMGXB4-208ENST00000498325 KIF15Q9NS87 1388 aa7.59□□□□□ -1.2
HMGXB4-208ENST00000498325 ERVK-7P63135 1459 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 TMEM229AB2RXF0 380 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 HYAL3O43820 417 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 NID1P14543 1247 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 MAP7D1Q3KQU3 841 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 BRINP3Q76B58 766 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 TNFRSF25Q93038 417 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 EID1Q9Y6B2 187 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 RTEL1-TNFRSF6BF6WH68 1400 aa7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 BLMP54132 1417 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-208ENST00000498325 ABCC3O15438 1527 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms