RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 MYOM1P52179 1685 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 UPP2O95045 317 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 SSFA2P28290 1259 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 CBLBQ13191 982 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 DDX17Q92841 729 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 NOVA2Q9UNW9 492 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 GLI3P10071 1580 aa8.09□□□□□ -1.11
TMEM39A-212ENST00000497993 TONSLQ96HA7 1378 aa8.09□□□□□ -1.12
TMEM39A-212ENST00000497993 BCL9LQ86UU0 1499 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 FOXO3O43524 673 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 ADH1AP07327 375 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 SCTRP47872 440 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 NAALADL2Q58DX5 795 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 OXLD1Q5BKU9 147 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 CPSF1Q10570 1443 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 THSD7AQ9UPZ6 1657 aa8.08□□□□□ -1.12
TMEM39A-212ENST00000497993 USP6P35125 1406 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 LCE2BO14633 110 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 NCOA4Q13772 614 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 SCARF1Q14162 830 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 NPAS4Q8IUM7 802 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 NOD1Q9Y239 953 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 ATAD2Q6PL18 1390 aa8.07□□□□□ -1.12
TMEM39A-212ENST00000497993 CD163L1Q9NR16 1453 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 EP400Q96L91 3159 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 PSME1Q06323 249 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 LTN1O94822 1766 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 RGPD5Q99666 1765 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 NINLQ9Y2I6 1382 aa8.06□□□□□ -1.12
TMEM39A-212ENST00000497993 USP19O94966 1318 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 ANKRD62A6NC57 917 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 GNRH1P01148 92 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 PTGIRP43119 386 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 KRT28Q7Z3Y7 464 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 NUDT16Q96DE0 195 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 CPDO75976 1380 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 KIF20BQ96Q89 1820 aa8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-212ENST00000497993 AFF2P51816 1311 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 EVC2Q86UK5 1308 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 RGS12O14924 1447 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 NFAT5O94916 1531 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 PARP4Q9UKK3 1724 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 FAM196BA6NMK8 535 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 BMP1P13497 986 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 SAFB2Q14151 953 aaKnown RBP eCLIP8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 HIRIP3Q9BW71 556 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 CDK19Q9BWU1 502 aa8.04□□□□□ -1.12
TMEM39A-212ENST00000497993 SPINT1O43278 529 aa8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 BMP2P12643 396 aa8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 RELBQ01201 579 aa8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 CLP1Q92989 425 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 MKRN1Q9UHC7 482 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-212ENST00000497993 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 SERPINB4P48594 390 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 NEUROD1Q13562 356 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 TESK2Q96S53 571 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 PCDHGA11Q9Y5H2 935 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 RGPD3A6NKT7 1758 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 RGPD4Q7Z3J3 1758 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 ACEP12821 1306 aa8.02□□□□□ -1.13
TMEM39A-212ENST00000497993 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
TMEM39A-212ENST00000497993 RECKO95980 971 aa8.01□□□□□ -1.13
TMEM39A-212ENST00000497993 RBM6P78332 1123 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms