RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 DDX12PQ92771 950 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
LRRC55-201ENST00000497933 IFI16Q16666 785 aaKnown RBP12.89□□□□□ -0.35
LRRC55-201ENST00000497933 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
LRRC55-201ENST00000497933 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 TSPY2A6NKD2 308 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 PTGS1P23219 599 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 TMTC2Q8N394 836 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 CCDC82Q8N4S0 544 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
LRRC55-201ENST00000497933 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CTAGE15A4D2H0 777 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 TRAF1Q13077 416 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 MCM6Q14566 821 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CTAGE6Q86UF2 777 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 PARD3Q8TEW0 1356 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 LIG1P18858 919 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 GUCY1B3Q02153 619 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 NPATQ14207 1427 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 BIN1O00499 593 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CETN1Q12798 172 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 CTAGE1Q96RT6 745 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 MEIS3Q99687 375 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
LRRC55-201ENST00000497933 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
LRRC55-201ENST00000497933 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 CCT2P78371 535 aaKnown RBP12.87□□□□□ -0.35
LRRC55-201ENST00000497933 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 KRBA2Q6ZNG9 492 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
LRRC55-201ENST00000497933 OPA1O60313 960 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 ANXA1P04083 346 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 METAP2P50579 478 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRRC55-201ENST00000497933 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 KRT23Q9C075 422 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 IL2RBP14784 551 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
LRRC55-201ENST00000497933 VPS18Q9P253 973 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 TRPM2O94759 1503 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
LRRC55-201ENST00000497933 NBPF11Q86T75 865 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
LRRC55-201ENST00000497933 DDB1Q16531 1140 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 ERO1AQ96HE7 468 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 DNA2P51530 1060 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 SPAG1Q07617 926 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 CTNNBL1Q8WYA6 563 aaPredicted RBP12.86□□□□□ -0.35
LRRC55-201ENST00000497933 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 BMP15O95972 392 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 TUBBP07437 444 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 PDE1AP54750 535 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 LRRC27Q9C0I9 530 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 F13A1P00488 732 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
LRRC55-201ENST00000497933 FBLN1P23142 703 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 ZNF445P59923 1031 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
LRRC55-201ENST00000497933 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
LRRC55-201ENST00000497933 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 UBASH3AP57075 661 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 TYRO3Q06418 890 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 MYO1BO43795 1136 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 SDSP20132 328 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 MICU3Q86XE3 530 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 ESR2Q92731 530 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
LRRC55-201ENST00000497933 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms