RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
NXF3-207ENST00000497850 FAM173BQ6P4H8 233 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 MRC1P22897 1456 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 SLFN14P0C7P3 912 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 PLBD2Q8NHP8 589 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 PRDM11Q9NQV5 511 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 CTNNA3Q9UI47 895 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
NXF3-207ENST00000497850 ZNF594Q96JF6 807 aaPredicted RBP15.32■□□□□ 0.04
NXF3-207ENST00000497850 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
NXF3-207ENST00000497850 SH2B1Q9NRF2 756 aaPredicted RBP15.32■□□□□ 0.04
NXF3-207ENST00000497850 GLI3P10071 1580 aa15.32■□□□□ 0.04
NXF3-207ENST00000497850 TAF5LO75529 589 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 ATP5JP18859 108 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 CASP7P55210 303 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 RABL6Q3YEC7 729 aaPredicted RBP15.31■□□□□ 0.04
NXF3-207ENST00000497850 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 PSMA5P28066 241 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 TOB2Q14106 344 aaPredicted RBP15.31■□□□□ 0.04
NXF3-207ENST00000497850 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
NXF3-207ENST00000497850 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 TMEM87AQ8NBN3 555 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
NXF3-207ENST00000497850 ZNF609O15014 1411 aa15.3■□□□□ 0.04
NXF3-207ENST00000497850 FOXO4P98177 505 aa15.3■□□□□ 0.04
NXF3-207ENST00000497850 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
NXF3-207ENST00000497850 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
NXF3-207ENST00000497850 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
NXF3-207ENST00000497850 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
NXF3-207ENST00000497850 CDK11BP21127 795 aaKnown RBP15.29■□□□□ 0.04
NXF3-207ENST00000497850 TIMM10P62072 90 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 SYCP1Q15431 976 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
NXF3-207ENST00000497850 LAMB4A4D0S4 1761 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 KDM4AO75164 1064 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 UBE2HP62256 183 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 CCDC85AQ96PX6 553 aaPredicted RBP15.29■□□□□ 0.04
NXF3-207ENST00000497850 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
NXF3-207ENST00000497850 LRRC24Q50LG9 513 aa15.28■□□□□ 0.04
NXF3-207ENST00000497850 GIMAP6Q6P9H5 292 aa15.28■□□□□ 0.04
NXF3-207ENST00000497850 GOLIM4O00461 696 aa15.28■□□□□ 0.04
NXF3-207ENST00000497850 SLC20A2Q08357 652 aa15.28■□□□□ 0.04
NXF3-207ENST00000497850 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
NXF3-207ENST00000497850 DCCP43146 1447 aa15.27■□□□□ 0.04
NXF3-207ENST00000497850 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
NXF3-207ENST00000497850 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.04
NXF3-207ENST00000497850 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.04
NXF3-207ENST00000497850 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 H7C1W4 665 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 AP5Z1O43299 807 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 JAK2O60674 1132 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 HAUS7Q99871 368 aa15.27■□□□□ 0.03
NXF3-207ENST00000497850 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.03
NXF3-207ENST00000497850 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.03
NXF3-207ENST00000497850 XIRP1Q702N8 1843 aaKnown RBP15.26■□□□□ 0.03
NXF3-207ENST00000497850 CYP21A2P08686 494 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
NXF3-207ENST00000497850 FOSBP53539 338 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 CPDO75976 1380 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 JCADQ9P266 1359 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 TJP1Q07157 1748 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 TERF2Q15554 542 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 Q6ZUG5 572 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 PLCD3Q8N3E9 789 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 NEK1Q96PY6 1258 aa15.26■□□□□ 0.03
NXF3-207ENST00000497850 TFIP11Q9UBB9 837 aaKnown RBP15.26■□□□□ 0.03
NXF3-207ENST00000497850 CCDC66A2RUB6 948 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 TPM3P06753 285 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 NUP188Q5SRE5 1749 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 ABCC6O95255 1503 aa15.25■□□□□ 0.03
NXF3-207ENST00000497850 PLCB2Q00722 1185 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 STOX1Q6ZVD7 989 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 DDX11Q96FC9 970 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 PARP4Q9UKK3 1724 aaKnown RBP15.24■□□□□ 0.03
NXF3-207ENST00000497850 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 USPL1Q5W0Q7 1092 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 FUCA2Q9BTY2 467 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
NXF3-207ENST00000497850 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 CAMK4Q16566 473 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 KIF18AQ8NI77 898 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 LAMA4Q16363 1823 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 SMTNL1A8MU46 457 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 IL2RBP14784 551 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 BRF1Q92994 677 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms