RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, human

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM164-208	ENST00000497754	TRAF5	O00463	557 aa		28.06	■■■□□ 2.08
TMEM164-208	ENST00000497754	ECE2	O60344	883 aa		28.06	■■■□□ 2.08
TMEM164-208	ENST00000497754	HIRA	P54198	1017 aa	Predicted RBP	28.06	■■■□□ 2.08
TMEM164-208	ENST00000497754	CTSW	P56202	376 aa		28.06	■■■□□ 2.08
TMEM164-208	ENST00000497754	SALL2	Q9Y467	1007 aa	Predicted RBP	28.06	■■■□□ 2.08
TMEM164-208	ENST00000497754	SHTN1	A0MZ66	631 aa		28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	RTL9	Q8NET4	1388 aa		28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	TRPM4	Q8TD43	1214 aa		28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	DPF2	Q92785	391 aa		28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	ABT1	Q9ULW3	272 aa	Known RBP	28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.05	■■■□□ 2.08
TMEM164-208	ENST00000497754	FLII	Q13045	1269 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	DOK7	Q18PE1	504 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	CST9	Q5W186	159 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	MICALL2	Q8IY33	904 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	ZC3H15	Q8WU90	426 aa	Known RBP	28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	KCNQ5	Q9NR82	932 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	ANKIB1	Q9P2G1	1089 aa		28.04	■■■□□ 2.08
TMEM164-208	ENST00000497754	THSD7B	Q9C0I4	1608 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	VAMP4	O75379	141 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	UFL1	O94874	794 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	ANKRD18A	Q8IVF6	992 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	TTLL11	Q8NHH1	800 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754	GGA1	Q9UJY5	639 aa		28.03	■■■□□ 2.08
TMEM164-208	ENST00000497754		H7C1D1	291 aa		28.02	■■■□□ 2.08
TMEM164-208	ENST00000497754		H7C1W4	665 aa		28.01	■■■□□ 2.07
TMEM164-208	ENST00000497754	CDC5L	Q99459	802 aa	Known RBP	28.01	■■■□□ 2.07
TMEM164-208	ENST00000497754	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.01	■■■□□ 2.07
TMEM164-208	ENST00000497754	XDH	P47989	1333 aa		28	■■■□□ 2.07
TMEM164-208	ENST00000497754	WDR33	Q9C0J8	1336 aa	Known RBP	28	■■■□□ 2.07
TMEM164-208	ENST00000497754	RPS12	P25398	132 aa	Known RBP	28	■■■□□ 2.07
TMEM164-208	ENST00000497754	EXOSC9	Q06265	439 aa	Known RBP	28	■■■□□ 2.07
TMEM164-208	ENST00000497754	GREM2	Q9H772	168 aa		28	■■■□□ 2.07
TMEM164-208	ENST00000497754	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28	■■■□□ 2.07
TMEM164-208	ENST00000497754	POLR2A	P24928	1970 aa	Known RBP	28	■■■□□ 2.07
TMEM164-208	ENST00000497754	FOXN1	O15353	648 aa		27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	FKBP5	Q13451	457 aa	Predicted RBP	27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	GCKR	Q14397	625 aa		27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	UBE3B	Q7Z3V4	1068 aa		27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	DNAAF4	Q8WXU2	420 aa		27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	TLL2	Q9Y6L7	1015 aa		27.99	■■■□□ 2.07
TMEM164-208	ENST00000497754	SAMD7	Q7Z3H4	446 aa		27.98	■■■□□ 2.07
TMEM164-208	ENST00000497754	PLA2G12B	Q9BX93	195 aa		27.98	■■■□□ 2.07
TMEM164-208	ENST00000497754	VIL1	P09327	827 aa	Known RBP	27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	CASP7	P55210	303 aa		27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	FAM9B	Q8IZU0	186 aa		27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	TNS4	Q8IZW8	715 aa		27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	BSDC1	Q9NW68	430 aa	Predicted RBP	27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	WBP1L	Q9NX94	342 aa		27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	ZNF609	O15014	1411 aa		27.97	■■■□□ 2.07
TMEM164-208	ENST00000497754	ATP2B4	P23634	1241 aa		27.96	■■■□□ 2.07
TMEM164-208	ENST00000497754	CDC37L1	Q7L3B6	337 aa		27.96	■■■□□ 2.07
TMEM164-208	ENST00000497754	LINS1	Q8NG48	757 aa		27.96	■■■□□ 2.07
TMEM164-208	ENST00000497754	ZNF646	O15015	1829 aa	Predicted RBP	27.95	■■■□□ 2.07
TMEM164-208	ENST00000497754	CELF2	O95319	508 aa	Known RBP	27.95	■■■□□ 2.06
TMEM164-208	ENST00000497754	EGFR	P00533	1210 aa		27.95	■■■□□ 2.06
TMEM164-208	ENST00000497754	MYH16	Q9H6N6	1097 aa		27.95	■■■□□ 2.06
TMEM164-208	ENST00000497754	MINPP1	Q9UNW1	487 aa		27.95	■■■□□ 2.06
TMEM164-208	ENST00000497754		G3V3G9	751 aa		27.94	■■■□□ 2.06
TMEM164-208	ENST00000497754	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.94	■■■□□ 2.06
TMEM164-208	ENST00000497754	DCAF8	Q5TAQ9	597 aa		27.94	■■■□□ 2.06
TMEM164-208	ENST00000497754	AIDA	Q96BJ3	306 aa		27.94	■■■□□ 2.06
TMEM164-208	ENST00000497754	CAPNS2	Q96L46	248 aa		27.94	■■■□□ 2.06
TMEM164-208	ENST00000497754	ECE1	P42892	770 aa		27.93	■■■□□ 2.06
TMEM164-208	ENST00000497754	SAPCD2	Q86UD0	394 aa		27.93	■■■□□ 2.06
TMEM164-208	ENST00000497754	MED23	Q9ULK4	1368 aa		27.92	■■■□□ 2.06
TMEM164-208	ENST00000497754	WTIP	A6NIX2	430 aa	Predicted RBP	27.92	■■■□□ 2.06
TMEM164-208	ENST00000497754	CYP4F22	Q6NT55	531 aa		27.92	■■■□□ 2.06
TMEM164-208	ENST00000497754	CSF1R	P07333	972 aa		27.91	■■■□□ 2.06
TMEM164-208	ENST00000497754	CTCF	P49711	727 aa	Predicted RBP	27.91	■■■□□ 2.06
TMEM164-208	ENST00000497754	MAP2K1	Q02750	393 aa	Predicted RBP	27.91	■■■□□ 2.06
TMEM164-208	ENST00000497754	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	PODN	Q7Z5L7	613 aa		27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	USP48	Q86UV5	1035 aa		27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	AGBL3	Q8NEM8	1001 aa		27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	HHIPL1	Q96JK4	782 aa		27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754	PRDM10	Q9NQV6	1147 aa		27.9	■■■□□ 2.06
TMEM164-208	ENST00000497754		A0A1B0GUL6	1792 aa		27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	ITGA6	P23229	1130 aa		27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	IGHMBP2	P38935	993 aa	Known RBP	27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	CCT4	P50991	539 aa	Known RBP	27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	KIF4B	Q2VIQ3	1234 aa		27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	FAM161A	Q3B820	660 aa		27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754	RBM26	Q5T8P6	1007 aa	Known RBP	27.89	■■■□□ 2.06
TMEM164-208	ENST00000497754		F6X3S4	739 aa		27.88	■■■□□ 2.05
TMEM164-208	ENST00000497754	BEND3	Q5T5X7	828 aa		27.88	■■■□□ 2.05
TMEM164-208	ENST00000497754	GML	Q99445	158 aa		27.88	■■■□□ 2.05
TMEM164-208	ENST00000497754	ZNF408	Q9H9D4	720 aa		27.88	■■■□□ 2.05
TMEM164-208	ENST00000497754	ZNF521	Q96K83	1311 aa		27.88	■■■□□ 2.05
TMEM164-208	ENST00000497754	ZNF280A	P59817	542 aa	Predicted RBP	27.87	■■■□□ 2.05
TMEM164-208	ENST00000497754	DLK2	Q6UY11	383 aa		27.87	■■■□□ 2.05
TMEM164-208	ENST00000497754	KRT26	Q7Z3Y9	468 aa		27.87	■■■□□ 2.05
TMEM164-208	ENST00000497754	USP17L3	A6NCW0	530 aa		27.86	■■■□□ 2.05
TMEM164-208	ENST00000497754	USP17L4	A6NCW7	530 aa		27.86	■■■□□ 2.05
TMEM164-208	ENST00000497754	GRM1	Q13255	1194 aa		27.86	■■■□□ 2.05
TMEM164-208	ENST00000497754	USP17L1	Q7RTZ2	530 aa		27.86	■■■□□ 2.05
TMEM164-208	ENST00000497754	LEMD3	Q9Y2U8	911 aa		27.86	■■■□□ 2.05
TMEM164-208	ENST00000497754	DCPS	Q96C86	337 aa	Known RBP	27.85	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms