RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
GARNL3-221ENST00000497703 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-221ENST00000497703 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
GARNL3-221ENST00000497703 CYP2E1P05181 493 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-221ENST00000497703 GAS6Q14393 721 aa11.68□□□□□ -0.54
GARNL3-221ENST00000497703 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
GARNL3-221ENST00000497703 NSUN5Q96P11 429 aaKnown RBP11.68□□□□□ -0.54
GARNL3-221ENST00000497703 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
GARNL3-221ENST00000497703 C2CD2LO14523 706 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 GHRHP01286 108 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-221ENST00000497703 GPLD1P80108 840 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 DAB2P98082 770 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
GARNL3-221ENST00000497703 TRPM4Q8TD43 1214 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 EPS8L3Q8TE67 593 aaKnown RBP11.67□□□□□ -0.54
GARNL3-221ENST00000497703 VTI1BQ9UEU0 232 aa11.67□□□□□ -0.54
GARNL3-221ENST00000497703 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
GARNL3-221ENST00000497703 NFX1Q12986 1120 aaKnown RBP11.66□□□□□ -0.54
GARNL3-221ENST00000497703 GOLGA6L1Q8N7Z2 621 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 SRCIN1Q9C0H9 1055 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 DNAJB12Q9NXW2 375 aaKnown RBP11.66□□□□□ -0.54
GARNL3-221ENST00000497703 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-221ENST00000497703 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 IGF1RP08069 1367 aa11.66□□□□□ -0.54
GARNL3-221ENST00000497703 KIF4AO95239 1232 aa11.65□□□□□ -0.54
GARNL3-221ENST00000497703 ALAS2P22557 587 aa11.65□□□□□ -0.54
GARNL3-221ENST00000497703 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
GARNL3-221ENST00000497703 EHD4Q9H223 541 aa11.65□□□□□ -0.54
GARNL3-221ENST00000497703 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
GARNL3-221ENST00000497703 EIF2AK2P19525 551 aaKnown RBP11.64□□□□□ -0.55
GARNL3-221ENST00000497703 VAMP1P23763 118 aa11.64□□□□□ -0.55
GARNL3-221ENST00000497703 SIK1P57059 783 aa11.64□□□□□ -0.55
GARNL3-221ENST00000497703 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-221ENST00000497703 SRSF11Q05519 484 aaKnown RBP11.64□□□□□ -0.55
GARNL3-221ENST00000497703 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
GARNL3-221ENST00000497703 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
GARNL3-221ENST00000497703 IRS1P35568 1242 aa11.63□□□□□ -0.55
GARNL3-221ENST00000497703 FAM35AQ86V20 835 aa11.63□□□□□ -0.55
GARNL3-221ENST00000497703 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
GARNL3-221ENST00000497703 AK5Q9Y6K8 562 aa11.63□□□□□ -0.55
GARNL3-221ENST00000497703 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 ADH7P40394 386 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 KIAA0319Q5VV43 1072 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 HFE2Q6ZVN8 426 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 OXCT2Q9BYC2 517 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-221ENST00000497703 SUV39H2Q9H5I1 410 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 GGA1Q9UJY5 639 aa11.62□□□□□ -0.55
GARNL3-221ENST00000497703 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 TSNAXIP1Q2TAA8 658 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 OSMRQ99650 979 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 LIN7BQ9HAP6 207 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 FAM8A1Q9UBU6 413 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 SLC6A14Q9UN76 642 aa11.61□□□□□ -0.55
GARNL3-221ENST00000497703 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 SMNDC1O75940 238 aaKnown RBP eCLIP11.6□□□□□ -0.55
GARNL3-221ENST00000497703 CPB1P15086 417 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 RNFT1Q5M7Z0 435 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 ELMSAN1Q6PJG2 1045 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 CNTNAP3BQ96NU0 1288 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 CNTNAP3Q9BZ76 1288 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 LATS2Q9NRM7 1088 aa11.6□□□□□ -0.55
GARNL3-221ENST00000497703 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-221ENST00000497703 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-221ENST00000497703 A0A1W2PP55 124 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 ELOA3DA6NLF2 546 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-221ENST00000497703 J3QW42 95 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 MRPL58Q14197 206 aaKnown RBP11.59□□□□□ -0.55
GARNL3-221ENST00000497703 ELOA3BQ3SY89 546 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 COL13A1Q5TAT6 717 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-221ENST00000497703 SLCO4C1Q6ZQN7 724 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 CEP120Q8N960 986 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 ELOA3Q8NG57 546 aa11.59□□□□□ -0.55
GARNL3-221ENST00000497703 ZBTB42B2RXF5 422 aa11.58□□□□□ -0.56
GARNL3-221ENST00000497703 GSTT1P30711 240 aa11.58□□□□□ -0.56
GARNL3-221ENST00000497703 NXPE4Q6UWF7 544 aa11.58□□□□□ -0.56
GARNL3-221ENST00000497703 ZKSCAN3Q9BRR0 538 aa11.58□□□□□ -0.56
GARNL3-221ENST00000497703 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 GRM2Q14416 872 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 PEAR1Q5VY43 1037 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-221ENST00000497703 CRELD1Q96HD1 420 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 PBX4Q9BYU1 374 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 ZFYVE1Q9HBF4 777 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 RNF19AQ9NV58 838 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
GARNL3-221ENST00000497703 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
GARNL3-221ENST00000497703 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
GARNL3-221ENST00000497703 PLD4Q96BZ4 506 aa11.56□□□□□ -0.56
GARNL3-221ENST00000497703 KLF15Q9UIH9 416 aa11.56□□□□□ -0.56
GARNL3-221ENST00000497703 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-221ENST00000497703 WFS1O76024 890 aa11.55□□□□□ -0.56
GARNL3-221ENST00000497703 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
GARNL3-221ENST00000497703 CEP135Q66GS9 1140 aa11.55□□□□□ -0.56
GARNL3-221ENST00000497703 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
GARNL3-221ENST00000497703 RASSF4Q9H2L5 321 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms