RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-214ENST00000497677 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
CTDSP1-214ENST00000497677 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 HSPA6P17066 643 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 USP44Q9H0E7 712 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 GGA1Q9UJY5 639 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 GJA3Q9Y6H8 435 aa20.17■□□□□ 0.82
CTDSP1-214ENST00000497677 RIMBP2O15034 1052 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 UFL1O94874 794 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 SCNN1DP51172 638 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 EYA3Q99504 573 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 HACL1Q9UJ83 578 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 XDHP47989 1333 aa20.16■□□□□ 0.82
CTDSP1-214ENST00000497677 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
CTDSP1-214ENST00000497677 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 RAD17O75943 681 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 EPHX2P34913 555 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 CIAPIN1Q6FI81 312 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 ZC3H12CQ9C0D7 883 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 DBNDD1Q9H9R9 158 aa20.14■□□□□ 0.81
CTDSP1-214ENST00000497677 BCAR3O75815 825 aa20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 EPS15P42566 896 aa20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 RABL6Q3YEC7 729 aaPredicted RBP20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 MPHOSPH8Q99549 860 aa20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
CTDSP1-214ENST00000497677 ECE2O60344 883 aa20.12■□□□□ 0.81
CTDSP1-214ENST00000497677 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
CTDSP1-214ENST00000497677 ANKRD44Q8N8A2 993 aa20.12■□□□□ 0.81
CTDSP1-214ENST00000497677 BICC1Q9H694 974 aaKnown RBP20.12■□□□□ 0.81
CTDSP1-214ENST00000497677 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
CTDSP1-214ENST00000497677 CHRNDQ07001 517 aa20.11■□□□□ 0.81
CTDSP1-214ENST00000497677 TNIP1Q15025 636 aa20.11■□□□□ 0.81
CTDSP1-214ENST00000497677 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
CTDSP1-214ENST00000497677 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
CTDSP1-214ENST00000497677 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 PSMD14O00487 310 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 GMPSP49915 693 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 CHADLQ6NUI6 762 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 GPRC5DQ9NZD1 345 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
CTDSP1-214ENST00000497677 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
CTDSP1-214ENST00000497677 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
CTDSP1-214ENST00000497677 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-214ENST00000497677 APLP1P51693 650 aa20.08■□□□□ 0.81
CTDSP1-214ENST00000497677 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-214ENST00000497677 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-214ENST00000497677 MED23Q9ULK4 1368 aa20.08■□□□□ 0.8
CTDSP1-214ENST00000497677 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 SNAP23O00161 211 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 VIL1P09327 827 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 TRIM27P14373 513 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 INTS3Q68E01 1043 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 HELBQ8NG08 1087 aaPredicted RBP20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 MYH3P11055 1940 aa20.07■□□□□ 0.8
CTDSP1-214ENST00000497677 IRS2Q9Y4H2 1338 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 IPO8O15397 1037 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 TAF5LO75529 589 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 ITGBL1O95965 494 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 KLRK1P26718 216 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 PODNQ7Z5L7 613 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 DPF2Q92785 391 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 PUS3Q9BZE2 481 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 SCN4AP35499 1836 aa20.06■□□□□ 0.8
CTDSP1-214ENST00000497677 USP50Q70EL3 339 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-214ENST00000497677 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-214ENST00000497677 CNOT7Q9UIV1 285 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-214ENST00000497677 RIPOR2Q9Y4F9 1068 aa20.05■□□□□ 0.8
CTDSP1-214ENST00000497677 G3V3G9 751 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 HTRA3P83110 453 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 TAF7LQ5H9L4 462 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 DCAF8Q5TAQ9 597 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 C15orf52Q6ZUT6 534 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 FRAT1Q92837 279 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
CTDSP1-214ENST00000497677 NEFLP07196 543 aa20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 UBTFL1P0CB47 393 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 RPS12P25398 132 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 RFX5P48382 616 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 MEIS3Q99687 375 aa20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
CTDSP1-214ENST00000497677 CNNM1Q9NRU3 951 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms