RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KARSQ15046 597 aaKnown RBP15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 MYCBPQ99417 103 aaPredicted RBP15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 FSD1Q9BTV5 496 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 ANXA1P04083 346 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 LONRF2Q1L5Z9 754 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 PA2G4Q9UQ80 394 aaKnown RBP15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 RESTQ13127 1097 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 CD163L1Q9NR16 1453 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 EIF3CLB5ME19 914 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 TPM1P09493 284 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 AMPHP49418 695 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 EXOC4Q96A65 974 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 SIRT1Q96EB6 747 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 EIF3CQ99613 913 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 AOX1Q06278 1338 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 EPB41L2O43491 1005 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 NECTIN1Q15223 517 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 AACSQ86V21 672 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 FAN1Q9Y2M0 1017 aa15.15■□□□□ 0.02
GAPVD1-220ENST00000497580 FANCGO15287 622 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 WDR24Q96S15 920 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 TM6SF1Q9BZW5 370 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 CCDC8Q9H0W5 538 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 SUGCTQ9HAC7 445 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 ANKRD1Q15327 319 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 IMPACTQ9P2X3 320 aa15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-220ENST00000497580 RPS6KB1P23443 525 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 TOB2Q14106 344 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 SSH3Q8TE77 659 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 FUT8Q9BYC5 575 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 IVLP07476 585 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 GUCY2CP25092 1073 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 MICALL1Q8N3F8 863 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 CCDC12Q8WUD4 166 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 GPATCH3Q96I76 525 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 RABEP2Q9H5N1 569 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 YY1AP1Q9H869 796 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 PHLPP2Q6ZVD8 1323 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 FANCCQ00597 558 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 GPR161Q8N6U8 529 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 SEC62Q99442 399 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 NCAPGQ9BPX3 1015 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
GAPVD1-220ENST00000497580 ABCA9Q8IUA7 1624 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 CCP110O43303 1012 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 ECHDC1Q9NTX5 307 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 UBASH3AP57075 661 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 TRIM65Q6PJ69 517 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 Q6ZUG5 572 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 RHOXF2BP0C7M4 288 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 MAGEA9P43362 315 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 DHX58Q96C10 678 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 RHOXF2Q9BQY4 288 aa15.12■□□□□ 0.01
GAPVD1-220ENST00000497580 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 GOLGA1Q92805 767 aa15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 JAKMIP3Q5VZ66 844 aa15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 DPF2Q92785 391 aa15.11■□□□□ 0.01
GAPVD1-220ENST00000497580 POLR3DP05423 398 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 STK38Q15208 465 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 OTUD7BQ6GQQ9 843 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 ADGRB3O60242 1522 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 HDGFL1Q5TGJ6 251 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 IRX2Q9BZI1 471 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 NCOA5Q9HCD5 579 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 DEPDC5O75140 1603 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 WASLO00401 505 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 ZSCAN12O43309 604 aa15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-220ENST00000497580 NDUFA8P51970 172 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms