RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
VPS26A-209ENST00000497564 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
VPS26A-209ENST00000497564 TAF1P21675 1872 aa17.5■□□□□ 0.39
VPS26A-209ENST00000497564 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS26A-209ENST00000497564 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
VPS26A-209ENST00000497564 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
VPS26A-209ENST00000497564 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
VPS26A-209ENST00000497564 GPBP1L1Q9HC44 474 aaPredicted RBP17.49■□□□□ 0.39
VPS26A-209ENST00000497564 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
VPS26A-209ENST00000497564 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
VPS26A-209ENST00000497564 SALL3Q9BXA9 1300 aa17.48■□□□□ 0.39
VPS26A-209ENST00000497564 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
VPS26A-209ENST00000497564 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-209ENST00000497564 CIAO1O76071 339 aa17.48■□□□□ 0.39
VPS26A-209ENST00000497564 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-209ENST00000497564 OS9Q13438 667 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-209ENST00000497564 CCDC57Q2TAC2 916 aa17.48■□□□□ 0.39
VPS26A-209ENST00000497564 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
VPS26A-209ENST00000497564 CEP350Q5VT06 3117 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 APBB1O00213 710 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 SASH1O94885 1247 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 LMNB1P20700 586 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 IFIT5Q13325 482 aaKnown RBP17.47■□□□□ 0.39
VPS26A-209ENST00000497564 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 GREM2Q9H772 168 aa17.47■□□□□ 0.39
VPS26A-209ENST00000497564 SF3B3Q15393 1217 aaKnown RBP17.46■□□□□ 0.39
VPS26A-209ENST00000497564 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
VPS26A-209ENST00000497564 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
VPS26A-209ENST00000497564 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
VPS26A-209ENST00000497564 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 EYA2O00167 538 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 ITGA6P23229 1130 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-209ENST00000497564 IL15P40933 162 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-209ENST00000497564 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 C16orf71Q8IYS4 520 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-209ENST00000497564 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
VPS26A-209ENST00000497564 SIL1Q9H173 461 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 AOX1Q06278 1338 aa17.45■□□□□ 0.38
VPS26A-209ENST00000497564 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
VPS26A-209ENST00000497564 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
VPS26A-209ENST00000497564 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
VPS26A-209ENST00000497564 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
VPS26A-209ENST00000497564 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
VPS26A-209ENST00000497564 KIF3CO14782 793 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 C1QTNF8P60827 252 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 OTUD7AQ8TE49 926 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-209ENST00000497564 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-209ENST00000497564 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 LTBP3Q9NS15 1303 aa17.43■□□□□ 0.38
VPS26A-209ENST00000497564 COL4A1P02462 1669 aa17.42■□□□□ 0.38
VPS26A-209ENST00000497564 MX1P20591 662 aa17.42■□□□□ 0.38
VPS26A-209ENST00000497564 PDE1AP54750 535 aa17.42■□□□□ 0.38
VPS26A-209ENST00000497564 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
VPS26A-209ENST00000497564 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
VPS26A-209ENST00000497564 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
VPS26A-209ENST00000497564 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-209ENST00000497564 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
VPS26A-209ENST00000497564 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-209ENST00000497564 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
VPS26A-209ENST00000497564 ZNF609O15014 1411 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 TFCP2Q12800 502 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
VPS26A-209ENST00000497564 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
VPS26A-209ENST00000497564 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
VPS26A-209ENST00000497564 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-209ENST00000497564 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
VPS26A-209ENST00000497564 TNNI3KQ59H18 835 aa17.39■□□□□ 0.37
VPS26A-209ENST00000497564 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
VPS26A-209ENST00000497564 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-209ENST00000497564 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
VPS26A-209ENST00000497564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-209ENST00000497564 FPGT-TNNI3KV9GXZ4 949 aa17.39■□□□□ 0.37
VPS26A-209ENST00000497564 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
VPS26A-209ENST00000497564 AACSQ86V21 672 aa17.38■□□□□ 0.37
VPS26A-209ENST00000497564 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
VPS26A-209ENST00000497564 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
VPS26A-209ENST00000497564 ZC3H4Q9UPT8 1303 aaKnown RBP17.38■□□□□ 0.37
VPS26A-209ENST00000497564 COL4A5P29400 1685 aa17.38■□□□□ 0.37
VPS26A-209ENST00000497564 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
VPS26A-209ENST00000497564 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
VPS26A-209ENST00000497564 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 RTKN2Q8IZC4 609 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 MYH7P12883 1935 aa17.37■□□□□ 0.37
VPS26A-209ENST00000497564 GLTPD2A6NH11 291 aa17.36■□□□□ 0.37
VPS26A-209ENST00000497564 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms