RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 IGHDP01880 384 aa24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 PRPF40BQ6NWY9 871 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 TMX4Q9H1E5 349 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 MINPP1Q9UNW1 487 aa24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 BRCA1P38398 1863 aaKnown RBP24.42■■□□□ 1.5
SCAMP3-209ENST00000497470 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
SCAMP3-209ENST00000497470 KDM2BQ8NHM5 1336 aa24.41■■□□□ 1.5
SCAMP3-209ENST00000497470 DALRD3Q5D0E6 543 aaKnown RBP24.41■■□□□ 1.5
SCAMP3-209ENST00000497470 ZNF594Q96JF6 807 aaPredicted RBP24.41■■□□□ 1.5
SCAMP3-209ENST00000497470 PA2G4Q9UQ80 394 aaKnown RBP24.41■■□□□ 1.5
SCAMP3-209ENST00000497470 ZBTB22O15209 634 aa24.4■■□□□ 1.5
SCAMP3-209ENST00000497470 VGLL2Q8N8G2 317 aa24.4■■□□□ 1.5
SCAMP3-209ENST00000497470 CEP126Q9P2H0 1117 aa24.4■■□□□ 1.5
SCAMP3-209ENST00000497470 AKAP2Q9Y2D5 859 aa24.4■■□□□ 1.5
SCAMP3-209ENST00000497470 PDE8BO95263 885 aa24.39■■□□□ 1.49
SCAMP3-209ENST00000497470 LRRC24Q50LG9 513 aa24.39■■□□□ 1.49
SCAMP3-209ENST00000497470 KLHDC4Q8TBB5 520 aa24.39■■□□□ 1.49
SCAMP3-209ENST00000497470 LEMD3Q9Y2U8 911 aa24.39■■□□□ 1.49
SCAMP3-209ENST00000497470 SASH1O94885 1247 aa24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 UBE4AQ14139 1066 aa24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 RHPN1Q8TCX5 695 aa24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 PUS3Q9BZE2 481 aaKnown RBP24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 VPS33BQ9H267 617 aa24.38■■□□□ 1.49
SCAMP3-209ENST00000497470 XDHP47989 1333 aa24.37■■□□□ 1.49
SCAMP3-209ENST00000497470 CHRNDQ07001 517 aa24.37■■□□□ 1.49
SCAMP3-209ENST00000497470 RTKN2Q8IZC4 609 aa24.37■■□□□ 1.49
SCAMP3-209ENST00000497470 EXOC6BQ9Y2D4 811 aa24.37■■□□□ 1.49
SCAMP3-209ENST00000497470 SNED1Q8TER0 1413 aa24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 OS9Q13438 667 aaPredicted RBP24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 METTL24Q5JXM2 366 aa24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 C15orf52Q6ZUT6 534 aaKnown RBP24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 RTFDC1Q9BY42 306 aaPredicted RBP24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 SIL1Q9H173 461 aa24.36■■□□□ 1.49
SCAMP3-209ENST00000497470 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
SCAMP3-209ENST00000497470 COL4A1P02462 1669 aa24.35■■□□□ 1.49
SCAMP3-209ENST00000497470 ATP2B4P23634 1241 aa24.35■■□□□ 1.49
SCAMP3-209ENST00000497470 NLGN2Q8NFZ4 835 aa24.35■■□□□ 1.49
SCAMP3-209ENST00000497470 TAF1P21675 1872 aa24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 FGFR2P21802 821 aa24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 NUCB1Q02818 461 aa24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 PUM3Q15397 648 aaKnown RBP24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 CCDC93Q567U6 631 aa24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 CLASRPQ8N2M8 674 aaKnown RBP24.34■■□□□ 1.49
SCAMP3-209ENST00000497470 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 SUPT20HQ8NEM7 779 aa24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 LPIN2Q92539 896 aa24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 PSMD1Q99460 953 aa24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 ZBTB47Q9UFB7 747 aaPredicted RBP24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
SCAMP3-209ENST00000497470 LTBP3Q9NS15 1303 aa24.33■■□□□ 1.48
SCAMP3-209ENST00000497470 KLHL34Q8N239 644 aa24.32■■□□□ 1.48
SCAMP3-209ENST00000497470 MPNDQ8N594 471 aa24.32■■□□□ 1.48
SCAMP3-209ENST00000497470 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
SCAMP3-209ENST00000497470 TFCP2Q12800 502 aa24.31■■□□□ 1.48
SCAMP3-209ENST00000497470 TNNI3KQ59H18 835 aa24.3■■□□□ 1.48
SCAMP3-209ENST00000497470 CHD1LQ86WJ1 897 aa24.3■■□□□ 1.48
SCAMP3-209ENST00000497470 ANKIB1Q9P2G1 1089 aa24.3■■□□□ 1.48
SCAMP3-209ENST00000497470 GGA1Q9UJY5 639 aa24.3■■□□□ 1.48
SCAMP3-209ENST00000497470 FPGT-TNNI3KV9GXZ4 949 aa24.3■■□□□ 1.48
SCAMP3-209ENST00000497470 IFIT1P09914 478 aaKnown RBP24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 GPSM2P81274 684 aa24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 NSFL1CQ9UNZ2 370 aaKnown RBP24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 ZNF804BA4D1E1 1349 aa24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 A0A1B0GUL6 1792 aa24.29■■□□□ 1.48
SCAMP3-209ENST00000497470 C21orf2O43822 256 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 SLC5A1P13866 664 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 ATP2B3Q16720 1220 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 B4GALNT3Q6L9W6 998 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 EYA3Q99504 573 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 SPEF2Q9C093 1822 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 MED23Q9ULK4 1368 aa24.28■■□□□ 1.48
SCAMP3-209ENST00000497470 ZNF609O15014 1411 aa24.27■■□□□ 1.48
SCAMP3-209ENST00000497470 TBC1D16Q8TBP0 767 aa24.27■■□□□ 1.48
SCAMP3-209ENST00000497470 ZNF512BQ96KM6 892 aaPredicted RBP24.27■■□□□ 1.48
SCAMP3-209ENST00000497470 BCS1LQ9Y276 419 aa24.27■■□□□ 1.48
SCAMP3-209ENST00000497470 A0A1B0GUL7 405 aa24.26■■□□□ 1.47
SCAMP3-209ENST00000497470 FKBP4Q02790 459 aaKnown RBP eCLIP24.26■■□□□ 1.47
SCAMP3-209ENST00000497470 EAF2Q96CJ1 260 aaPredicted RBP24.26■■□□□ 1.47
SCAMP3-209ENST00000497470 IRS2Q9Y4H2 1338 aa24.26■■□□□ 1.47
SCAMP3-209ENST00000497470 TAF5LO75529 589 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 KCNJ4P48050 445 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 HELBQ8NG08 1087 aaPredicted RBP24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 POLLQ9UGP5 575 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 DUOX1Q9NRD9 1551 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 FER1L6Q2WGJ9 1857 aa24.24■■□□□ 1.47
SCAMP3-209ENST00000497470 UFL1O94874 794 aa24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 IFIT2P09913 472 aaKnown RBP24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 OSBPL3Q9H4L5 887 aa24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 IL1RAPL2Q9NP60 686 aa24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 STAP2Q9UGK3 403 aa24.23■■□□□ 1.47
SCAMP3-209ENST00000497470 ARAP2Q8WZ64 1704 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 AOX1Q06278 1338 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 TTC41PQ6P2S7 1318 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 SALL3Q9BXA9 1300 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms