RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 M0R082 166 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 CPB1P15086 417 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 GPLD1P80108 840 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 FAM35AQ86V20 835 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 GLYCTKQ8IVS8 523 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
SMC4-225ENST00000497203 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
SMC4-225ENST00000497203 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
SMC4-225ENST00000497203 PSAPP07602 524 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 NRLP54845 237 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 ARHGAP4P98171 946 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 COL9A3Q14050 684 aaPredicted RBP7.07□□□□□ -1.28
SMC4-225ENST00000497203 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 NSUN5Q96P11 429 aaKnown RBP7.07□□□□□ -1.28
SMC4-225ENST00000497203 ELP3Q9H9T3 547 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 TMEM63CQ9P1W3 806 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 GNEQ9Y223 722 aaKnown RBP7.07□□□□□ -1.28
SMC4-225ENST00000497203 IVNS1ABPQ9Y6Y0 642 aa7.07□□□□□ -1.28
SMC4-225ENST00000497203 J3QW42 95 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 GNB5O14775 395 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
SMC4-225ENST00000497203 PLAURQ03405 335 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 PCSK7Q16549 785 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 PERM1Q5SV97 790 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
SMC4-225ENST00000497203 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 OR13H1Q8NG92 308 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 GOLGA2P5Q9HBQ8 144 aa7.06□□□□□ -1.28
SMC4-225ENST00000497203 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
SMC4-225ENST00000497203 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
SMC4-225ENST00000497203 HOXD8P13378 290 aaPredicted RBP7.05□□□□□ -1.28
SMC4-225ENST00000497203 PCSK2P16519 638 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 SOX18P35713 384 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
SMC4-225ENST00000497203 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
SMC4-225ENST00000497203 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
SMC4-225ENST00000497203 PRDM6Q9NQX0 595 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 CNTN3Q9P232 1028 aa7.05□□□□□ -1.28
SMC4-225ENST00000497203 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 SOWAHDA6NJG2 315 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 PIK3R2O00459 728 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 NID1P14543 1247 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 EIF2AK2P19525 551 aaKnown RBP7.04□□□□□ -1.28
SMC4-225ENST00000497203 SIK1P57059 783 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
SMC4-225ENST00000497203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.04□□□□□ -1.28
SMC4-225ENST00000497203 LILRB5O75023 590 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 RGS9O75916 674 aaPredicted RBP7.03□□□□□ -1.28
SMC4-225ENST00000497203 CHRNA4P43681 627 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 ELMSAN1Q6PJG2 1045 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 GJD3Q8N144 294 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
SMC4-225ENST00000497203 USP5P45974 858 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 AFF1P51825 1210 aaKnown RBP7.02□□□□□ -1.29
SMC4-225ENST00000497203 GRIK5Q16478 980 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 SND1Q7KZF4 910 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMC4-225ENST00000497203 C1orf127Q8N9H9 656 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 SMG9Q9H0W8 520 aaKnown RBP7.02□□□□□ -1.29
SMC4-225ENST00000497203 CHRDQ9H2X0 955 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 KANSL3Q9P2N6 904 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 BRPF3Q9ULD4 1205 aa7.02□□□□□ -1.29
SMC4-225ENST00000497203 TNFRSF21O75509 655 aa7.01□□□□□ -1.29
SMC4-225ENST00000497203 HYAL2Q12891 473 aa7.01□□□□□ -1.29
SMC4-225ENST00000497203 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
SMC4-225ENST00000497203 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
SMC4-225ENST00000497203 KIF4AO95239 1232 aa7□□□□□ -1.29
SMC4-225ENST00000497203 GHRHP01286 108 aa7□□□□□ -1.29
SMC4-225ENST00000497203 MFAP1P55081 439 aaKnown RBP7□□□□□ -1.29
SMC4-225ENST00000497203 EHHADHQ08426 723 aa7□□□□□ -1.29
SMC4-225ENST00000497203 NOP53Q9NZM5 478 aaKnown RBP7□□□□□ -1.29
SMC4-225ENST00000497203 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
SMC4-225ENST00000497203 NDUFB5O43674 189 aa6.99□□□□□ -1.29
SMC4-225ENST00000497203 CES1P23141 567 aa6.99□□□□□ -1.29
SMC4-225ENST00000497203 ATP11AP98196 1134 aa6.99□□□□□ -1.29
SMC4-225ENST00000497203 TTC9Q92623 222 aa6.99□□□□□ -1.29
SMC4-225ENST00000497203 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 EREGO14944 169 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 PHACTR2O75167 634 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 ACPPP15309 386 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 CCDC27Q2M243 656 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 ILDR2Q71H61 639 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 NCAPG2Q86XI2 1143 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 CEP120Q8N960 986 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 FAM129BQ96TA1 746 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms