RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 GRIPAP1Q4V328 841 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 AFDNP55196 1824 aaKnown RBP4.39□□□□□ -1.71
SHTN1-206ENST00000497044 LARP1Q6PKG0 1096 aaKnown RBP4.39□□□□□ -1.71
SHTN1-206ENST00000497044 VRTNQ9H8Y1 702 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 AXIN2Q9Y2T1 843 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 EVC2Q86UK5 1308 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 IL2RBP14784 551 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 EVA1CP58658 441 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 HHIPL1Q96JK4 782 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 SLC4A9Q96Q91 983 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 SEPT9Q9UHD8 586 aaPredicted RBP4.39□□□□□ -1.71
SHTN1-206ENST00000497044 TTC21BQ7Z4L5 1316 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L3A6NCW0 530 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L4A6NCW7 530 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L2Q6R6M4 530 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L1Q7RTZ2 530 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 NPAS4Q8IUM7 802 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 CCDC97Q96F63 343 aaPredicted RBP4.38□□□□□ -1.71
SHTN1-206ENST00000497044 POGKQ9P215 609 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 MAP10Q9P2G4 905 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 MAP4K5Q9Y4K4 846 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 LAMB4A4D0S4 1761 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 MFAP1P55081 439 aaKnown RBP4.38□□□□□ -1.71
SHTN1-206ENST00000497044 MAP7D1Q3KQU3 841 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 SMC1BQ8NDV3 1235 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 NGDNQ8NEJ9 315 aaKnown RBP4.38□□□□□ -1.71
SHTN1-206ENST00000497044 CDK19Q9BWU1 502 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 KDM3BQ7LBC6 1761 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 CENPJQ9HC77 1338 aaPredicted RBP4.38□□□□□ -1.71
SHTN1-206ENST00000497044 SIAH2O43255 324 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 CCDC9Q9Y3X0 531 aaKnown RBP4.38□□□□□ -1.71
SHTN1-206ENST00000497044 LRRC37AA6NMS7 1700 aa4.38□□□□□ -1.71
SHTN1-206ENST00000497044 ARHGAP4P98171 946 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 LARGE2Q8N3Y3 721 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 RDH13Q8NBN7 331 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 IP6K1Q92551 441 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 DCAF5Q96JK2 942 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 KIAA1024Q9UPX6 916 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 HIRAP54198 1017 aaPredicted RBP4.37□□□□□ -1.71
SHTN1-206ENST00000497044 NYAP1Q6ZVC0 841 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 VPS33BQ9H267 617 aa4.37□□□□□ -1.71
SHTN1-206ENST00000497044 IBTKQ9P2D0 1353 aaPredicted RBP4.37□□□□□ -1.71
SHTN1-206ENST00000497044 THSD4Q6ZMP0 1018 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 ARID3AQ99856 593 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 HELBQ8NG08 1087 aaPredicted RBP4.36□□□□□ -1.71
SHTN1-206ENST00000497044 ZNF646O15015 1829 aaPredicted RBP4.36□□□□□ -1.71
SHTN1-206ENST00000497044 CA12O43570 354 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 FMNL1O95466 1100 aaPredicted RBP4.36□□□□□ -1.71
SHTN1-206ENST00000497044 MTFR1Q15390 333 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 KDF1Q8NAX2 398 aaPredicted RBP4.36□□□□□ -1.71
SHTN1-206ENST00000497044 PRR14Q9BWN1 585 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 PRDM9Q9NQV7 894 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 ANKRD31Q8N7Z5 1873 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 PSME4Q14997 1843 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 PCDH11XQ9BZA7 1347 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 PCDH11YQ9BZA8 1340 aa4.36□□□□□ -1.71
SHTN1-206ENST00000497044 ZNF827Q17R98 1081 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 ZNF428Q96B54 188 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 KLF16Q9BXK1 252 aaPredicted RBP4.35□□□□□ -1.71
SHTN1-206ENST00000497044 ZBTB7CA1YPR0 619 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L5A8MUK1 530 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 ANKRD36CQ5JPF3 1778 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 LAMB2P55268 1798 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 CNTNAP1P78357 1384 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 CCNYL3P0C7X3 344 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 ERCC3P19447 782 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 SCNN1DP51172 638 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 ERVK-9P63128 1117 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 DSC3Q14574 896 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 PLPP7Q8NBV4 271 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 PRM3Q9NNZ6 103 aa4.35□□□□□ -1.71
SHTN1-206ENST00000497044 NOVA2Q9UNW9 492 aaKnown RBP4.35□□□□□ -1.71
SHTN1-206ENST00000497044 YBX3P16989 372 aaKnown RBP eCLIP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 MRPL58Q14197 206 aaKnown RBP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 SOGA3Q5TF21 947 aa4.34□□□□□ -1.71
SHTN1-206ENST00000497044 LMOD1P29536 600 aaPredicted RBP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 ABTB2Q8N961 1025 aa4.34□□□□□ -1.71
SHTN1-206ENST00000497044 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
SHTN1-206ENST00000497044 GZF1Q9H116 711 aaPredicted RBP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 CXXC1Q9P0U4 656 aaPredicted RBP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 PASKQ96RG2 1323 aa4.34□□□□□ -1.71
SHTN1-206ENST00000497044 COL11A2P13942 1736 aaPredicted RBP4.34□□□□□ -1.71
SHTN1-206ENST00000497044 MEGF6O75095 1541 aa4.34□□□□□ -1.72
SHTN1-206ENST00000497044 GPR162Q16538 588 aa4.34□□□□□ -1.72
SHTN1-206ENST00000497044 TMEM229AB2RXF0 380 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 C21orf2O43822 256 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 ZPR1O75312 459 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 ADH1BP00325 375 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 PLA2G2CQ5R387 149 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.33□□□□□ -1.72
SHTN1-206ENST00000497044 CDHR2Q9BYE9 1310 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 USP47Q96K76 1375 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 MMP14P50281 582 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 EIF4G2P78344 907 aaKnown RBP eCLIP4.33□□□□□ -1.725e-23■■■■■ 59.6
SHTN1-206ENST00000497044 NLGN1Q8N2Q7 840 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 PMFBP1Q8TBY8 1022 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 UNC93B1Q9H1C4 597 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 SAGE1Q9NXZ1 904 aa4.33□□□□□ -1.72
SHTN1-206ENST00000497044 KTN1Q86UP2 1357 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms