RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 BBOX1O75936 387 aa22.58■■□□□ 1.2
RGP1-202ENST00000496906 DPEP1P16444 411 aa22.58■■□□□ 1.2
RGP1-202ENST00000496906 PPP1R1BQ9UD71 204 aaPredicted RBP22.58■■□□□ 1.2
RGP1-202ENST00000496906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.57■■□□□ 1.2
RGP1-202ENST00000496906 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
RGP1-202ENST00000496906 A0A0G2JLW4 131 aa22.56■■□□□ 1.2
RGP1-202ENST00000496906 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
RGP1-202ENST00000496906 KCNA3P22001 575 aa22.56■■□□□ 1.2
RGP1-202ENST00000496906 TFCP2Q12800 502 aa22.56■■□□□ 1.2
RGP1-202ENST00000496906 KLHL34Q8N239 644 aa22.56■■□□□ 1.2
RGP1-202ENST00000496906 CNKSR1Q969H4 720 aa22.56■■□□□ 1.2
RGP1-202ENST00000496906 METTL24Q5JXM2 366 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 TMC4Q7Z404 712 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 CHD1LQ86WJ1 897 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 VGLL2Q8N8G2 317 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 IL1RAPL2Q9NP60 686 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 MINPP1Q9UNW1 487 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
RGP1-202ENST00000496906 CHRNDQ07001 517 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 CEP126Q9P2H0 1117 aa22.55■■□□□ 1.2
RGP1-202ENST00000496906 PRPF40BQ6NWY9 871 aaKnown RBP22.54■■□□□ 1.2
RGP1-202ENST00000496906 SLC51AQ86UW1 340 aa22.54■■□□□ 1.2
RGP1-202ENST00000496906 LNPKQ9C0E8 428 aa22.54■■□□□ 1.2
RGP1-202ENST00000496906 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
RGP1-202ENST00000496906 LRRC37AA6NMS7 1700 aa22.52■■□□□ 1.2
RGP1-202ENST00000496906 PDE8BO95263 885 aa22.52■■□□□ 1.2
RGP1-202ENST00000496906 GPR108Q9NPR9 543 aa22.52■■□□□ 1.2
RGP1-202ENST00000496906 ATP6V0A2Q9Y487 856 aa22.52■■□□□ 1.2
RGP1-202ENST00000496906 TNNI3KQ59H18 835 aa22.51■■□□□ 1.19
RGP1-202ENST00000496906 SP8Q8IXZ3 490 aa22.51■■□□□ 1.19
RGP1-202ENST00000496906 CLASRPQ8N2M8 674 aaKnown RBP22.51■■□□□ 1.19
RGP1-202ENST00000496906 TTLL6Q8N841 843 aa22.51■■□□□ 1.19
RGP1-202ENST00000496906 HELBQ8NG08 1087 aaPredicted RBP22.51■■□□□ 1.19
RGP1-202ENST00000496906 FPGT-TNNI3KV9GXZ4 949 aa22.51■■□□□ 1.19
RGP1-202ENST00000496906 A0A1B0GUL6 1792 aa22.51■■□□□ 1.19
RGP1-202ENST00000496906 NLGN2Q8NFZ4 835 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
RGP1-202ENST00000496906 ANKRD2Q9GZV1 360 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 ZNF609O15014 1411 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 SLX4Q8IY92 1834 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 CACNA1SQ13698 1873 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 TAF5LO75529 589 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 EAF2Q96CJ1 260 aaPredicted RBP22.5■■□□□ 1.19
RGP1-202ENST00000496906 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
RGP1-202ENST00000496906 C7orf43Q8WVR3 580 aa22.49■■□□□ 1.19
RGP1-202ENST00000496906 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
RGP1-202ENST00000496906 AKAP2Q9Y2D5 859 aa22.49■■□□□ 1.19
RGP1-202ENST00000496906 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
RGP1-202ENST00000496906 XDHP47989 1333 aa22.48■■□□□ 1.19
RGP1-202ENST00000496906 FGFR2P21802 821 aa22.48■■□□□ 1.19
RGP1-202ENST00000496906 PDE4AP27815 886 aa22.48■■□□□ 1.19
RGP1-202ENST00000496906 PUM3Q15397 648 aaKnown RBP22.48■■□□□ 1.19
RGP1-202ENST00000496906 AACSQ86V21 672 aa22.48■■□□□ 1.19
RGP1-202ENST00000496906 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
RGP1-202ENST00000496906 C16orf71Q8IYS4 520 aaPredicted RBP22.48■■□□□ 1.19
RGP1-202ENST00000496906 SRCAPQ6ZRS2 3230 aa22.47■■□□□ 1.19
RGP1-202ENST00000496906 A0A1B0GUL7 405 aa22.47■■□□□ 1.19
RGP1-202ENST00000496906 GPSM2P81274 684 aa22.47■■□□□ 1.19
RGP1-202ENST00000496906 ATP2B3Q16720 1220 aa22.47■■□□□ 1.19
RGP1-202ENST00000496906 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
RGP1-202ENST00000496906 SNAP23O00161 211 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 OTUD7AQ8TE49 926 aaPredicted RBP22.46■■□□□ 1.19
RGP1-202ENST00000496906 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 ANKIB1Q9P2G1 1089 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 SALL3Q9BXA9 1300 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 TIMM10P62072 90 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 UBE4AQ14139 1066 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 LPIN2Q92539 896 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 CCDC8Q9H0W5 538 aaPredicted RBP22.46■■□□□ 1.19
RGP1-202ENST00000496906 LTBP1Q14766 1721 aa22.46■■□□□ 1.19
RGP1-202ENST00000496906 IFIT2P09913 472 aaKnown RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 DALRD3Q5D0E6 543 aaKnown RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 SYT17Q9BSW7 474 aa22.45■■□□□ 1.18
RGP1-202ENST00000496906 TMX4Q9H1E5 349 aaPredicted RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 TLR7Q9NYK1 1049 aaKnown RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 DBNLQ9UJU6 430 aaKnown RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 NSFL1CQ9UNZ2 370 aaKnown RBP22.45■■□□□ 1.18
RGP1-202ENST00000496906 SNED1Q8TER0 1413 aa22.45■■□□□ 1.18
RGP1-202ENST00000496906 WTIPA6NIX2 430 aaPredicted RBP22.44■■□□□ 1.18
RGP1-202ENST00000496906 CC2D2BQ6DHV5 1058 aa22.44■■□□□ 1.18
RGP1-202ENST00000496906 ZNF219Q9P2Y4 722 aaPredicted RBP22.44■■□□□ 1.18
RGP1-202ENST00000496906 WWC3Q9ULE0 1092 aa22.44■■□□□ 1.18
RGP1-202ENST00000496906 LEMD3Q9Y2U8 911 aa22.44■■□□□ 1.18
RGP1-202ENST00000496906 ZNF804BA4D1E1 1349 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 C21orf2O43822 256 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 SLC5A1P13866 664 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 NEUROD6Q96NK8 337 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 DBNDD2Q9BQY9 259 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 DUOX1Q9NRD9 1551 aa22.43■■□□□ 1.18
RGP1-202ENST00000496906 IFIT1P09914 478 aaKnown RBP22.42■■□□□ 1.18
RGP1-202ENST00000496906 KCNJ4P48050 445 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 PLEKHM2Q8IWE5 1019 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 MPNDQ8N594 471 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 XAGE2Q96GT9 111 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 GGA1Q9UJY5 639 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 ARAP2Q8WZ64 1704 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 MX1P20591 662 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 ATP2B4P23634 1241 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 ADORA1P30542 326 aa22.42■■□□□ 1.18
RGP1-202ENST00000496906 TBC1D16Q8TBP0 767 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms