RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 PPP1R37O75864 691 aa10.04□□□□□ -0.8
SRRM1-220ENST00000496882 SF3B3Q15393 1217 aaKnown RBP10.04□□□□□ -0.8
SRRM1-220ENST00000496882 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
SRRM1-220ENST00000496882 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
SRRM1-220ENST00000496882 FAM9BQ8IZU0 186 aa10.04□□□□□ -0.8
SRRM1-220ENST00000496882 EFCAB3Q8N7B9 438 aa10.04□□□□□ -0.8
SRRM1-220ENST00000496882 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-220ENST00000496882 SCN4AP35499 1836 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 HTRA3P83110 453 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 DNAJC5GQ8N7S2 189 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 TSPYL6Q8N831 410 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 SNED1Q8TER0 1413 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 EYA3Q99504 573 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
SRRM1-220ENST00000496882 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
SRRM1-220ENST00000496882 CEP350Q5VT06 3117 aa10.02□□□□□ -0.8
SRRM1-220ENST00000496882 G3V3G9 751 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 C6orf229H3BNL8 230 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 PDE8AO60658 829 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 PCCAP05165 728 aaPredicted RBP10.02□□□□□ -0.81
SRRM1-220ENST00000496882 POTEIP0CG38 1075 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 TNIP1Q15025 636 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 KSR2Q6VAB6 950 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 MYH16Q9H6N6 1097 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 ZNRF3Q9ULT6 936 aa10.02□□□□□ -0.81
SRRM1-220ENST00000496882 NSFL1CQ9UNZ2 370 aaKnown RBP10.02□□□□□ -0.81
SRRM1-220ENST00000496882 LAMB2P55268 1798 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
SRRM1-220ENST00000496882 KIAA2012Q0VF49 1180 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 CIAPIN1Q6FI81 312 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
SRRM1-220ENST00000496882 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
SRRM1-220ENST00000496882 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
SRRM1-220ENST00000496882 MAP3K13O43283 966 aa10□□□□□ -0.81
SRRM1-220ENST00000496882 FKBP5Q13451 457 aaPredicted RBP10□□□□□ -0.81
SRRM1-220ENST00000496882 ANKRD18AQ8IVF6 992 aa10□□□□□ -0.81
SRRM1-220ENST00000496882 CNTROBQ8N137 903 aa10□□□□□ -0.81
SRRM1-220ENST00000496882 CDC5LQ99459 802 aaKnown RBP10□□□□□ -0.81
SRRM1-220ENST00000496882 ANKIB1Q9P2G1 1089 aa10□□□□□ -0.81
SRRM1-220ENST00000496882 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
SRRM1-220ENST00000496882 DDX60Q8IY21 1712 aaKnown RBP9.99□□□□□ -0.81
SRRM1-220ENST00000496882 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 RAD17O75943 681 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 SCNN1DP51172 638 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 CTSWP56202 376 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 CXCL9Q07325 125 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 FLIIQ13045 1269 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 SLC51AQ86UW1 340 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 JMYQ8N9B5 988 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 KIF12Q96FN5 646 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-220ENST00000496882 ZC3H12CQ9C0D7 883 aaKnown RBP9.99□□□□□ -0.81
SRRM1-220ENST00000496882 ADARB2Q9NS39 739 aaKnown RBP9.99□□□□□ -0.81
SRRM1-220ENST00000496882 GGA1Q9UJY5 639 aa9.99□□□□□ -0.81
SRRM1-220ENST00000496882 H7C1D1 291 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 UFL1O94874 794 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 EPS15P42566 896 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 GMPSP49915 693 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 GPSM2P81274 684 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 MAP1SQ66K74 1059 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 DNAAF4Q8WXU2 420 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 SEC31BQ9NQW1 1179 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 GPRC5DQ9NZD1 345 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
SRRM1-220ENST00000496882 COL4A5P29400 1685 aa9.98□□□□□ -0.81
SRRM1-220ENST00000496882 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 IGHMBP2P38935 993 aaKnown RBP9.97□□□□□ -0.81
SRRM1-220ENST00000496882 CWF19L2Q2TBE0 894 aaKnown RBP9.97□□□□□ -0.81
SRRM1-220ENST00000496882 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 DBNDD1Q9H9R9 158 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 PASKQ96RG2 1323 aa9.97□□□□□ -0.81
SRRM1-220ENST00000496882 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
SRRM1-220ENST00000496882 ECE2O60344 883 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 VAMP4O75379 141 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 ITGBL1O95965 494 aaPredicted RBP9.96□□□□□ -0.82
SRRM1-220ENST00000496882 ATP2B4P23634 1241 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 RPS12P25398 132 aaKnown RBP9.96□□□□□ -0.82
SRRM1-220ENST00000496882 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 G2E3Q7L622 706 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 TBC1D16Q8TBP0 767 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.82
SRRM1-220ENST00000496882 POLLQ9UGP5 575 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 ABT1Q9ULW3 272 aaKnown RBP9.96□□□□□ -0.82
SRRM1-220ENST00000496882 XDHP47989 1333 aa9.96□□□□□ -0.82
SRRM1-220ENST00000496882 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-220ENST00000496882 PSMD14O00487 310 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms