RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 DNAAF4Q8WXU2 420 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 EYA3Q99504 573 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 GREM2Q9H772 168 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 KCNQ5Q9NR82 932 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
NEK4-206ENST00000496822 RTL9Q8NET4 1388 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
NEK4-206ENST00000496822 TRAF5O00463 557 aa19.29■□□□□ 0.68
NEK4-206ENST00000496822 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
NEK4-206ENST00000496822 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
NEK4-206ENST00000496822 GCKRQ14397 625 aa19.29■□□□□ 0.68
NEK4-206ENST00000496822 MYH16Q9H6N6 1097 aa19.29■□□□□ 0.68
NEK4-206ENST00000496822 ANKIB1Q9P2G1 1089 aa19.29■□□□□ 0.68
NEK4-206ENST00000496822 HIRAP54198 1017 aaPredicted RBP19.28■□□□□ 0.68
NEK4-206ENST00000496822 CASP7P55210 303 aa19.28■□□□□ 0.68
NEK4-206ENST00000496822 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
NEK4-206ENST00000496822 MYH3P11055 1940 aa19.27■□□□□ 0.68
NEK4-206ENST00000496822 F6X3S4 739 aa19.27■□□□□ 0.68
NEK4-206ENST00000496822 MICALL2Q8IY33 904 aa19.27■□□□□ 0.68
NEK4-206ENST00000496822 LINS1Q8NG48 757 aa19.27■□□□□ 0.68
NEK4-206ENST00000496822 CDC5LQ99459 802 aaKnown RBP19.27■□□□□ 0.68
NEK4-206ENST00000496822 CNOT7Q9UIV1 285 aaKnown RBP19.27■□□□□ 0.68
NEK4-206ENST00000496822 SPEF2Q9C093 1822 aa19.27■□□□□ 0.68
NEK4-206ENST00000496822 XDHP47989 1333 aa19.26■□□□□ 0.67
NEK4-206ENST00000496822 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
NEK4-206ENST00000496822 IFFO2Q5TF58 517 aa19.26■□□□□ 0.67
NEK4-206ENST00000496822 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
NEK4-206ENST00000496822 SCN9AQ15858 1988 aa19.26■□□□□ 0.67
NEK4-206ENST00000496822 VEGFBP49765 207 aa19.25■□□□□ 0.67
NEK4-206ENST00000496822 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
NEK4-206ENST00000496822 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
NEK4-206ENST00000496822 EGFRP00533 1210 aa19.24■□□□□ 0.67
NEK4-206ENST00000496822 COL13A1Q5TAT6 717 aaPredicted RBP19.24■□□□□ 0.67
NEK4-206ENST00000496822 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
NEK4-206ENST00000496822 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
NEK4-206ENST00000496822 ABT1Q9ULW3 272 aaKnown RBP19.24■□□□□ 0.67
NEK4-206ENST00000496822 MINPP1Q9UNW1 487 aa19.24■□□□□ 0.67
NEK4-206ENST00000496822 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 RASSF10A6NK89 507 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 BEND3Q5T5X7 828 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 CST9Q5W186 159 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 DPF2Q92785 391 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 PGAP2Q9UHJ9 254 aa19.23■□□□□ 0.67
NEK4-206ENST00000496822 H7C1D1 291 aa19.22■□□□□ 0.67
NEK4-206ENST00000496822 ITGA6P23229 1130 aa19.22■□□□□ 0.67
NEK4-206ENST00000496822 ATP2B4P23634 1241 aa19.22■□□□□ 0.67
NEK4-206ENST00000496822 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
NEK4-206ENST00000496822 G3V3G9 751 aa19.21■□□□□ 0.67
NEK4-206ENST00000496822 CSF1RP07333 972 aa19.21■□□□□ 0.67
NEK4-206ENST00000496822 VIL1P09327 827 aaKnown RBP19.21■□□□□ 0.67
NEK4-206ENST00000496822 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
NEK4-206ENST00000496822 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
NEK4-206ENST00000496822 DCAF8Q5TAQ9 597 aa19.21■□□□□ 0.67
NEK4-206ENST00000496822 MED23Q9ULK4 1368 aa19.2■□□□□ 0.66
NEK4-206ENST00000496822 IGHMBP2P38935 993 aaKnown RBP19.2■□□□□ 0.66
NEK4-206ENST00000496822 ZC3H15Q8WU90 426 aaKnown RBP19.2■□□□□ 0.66
NEK4-206ENST00000496822 TRPM7Q96QT4 1865 aa19.2■□□□□ 0.66
NEK4-206ENST00000496822 CELF2O95319 508 aaKnown RBP19.19■□□□□ 0.66
NEK4-206ENST00000496822 CCT4P50991 539 aaKnown RBP19.19■□□□□ 0.66
NEK4-206ENST00000496822 FOXO4P98177 505 aa19.19■□□□□ 0.66
NEK4-206ENST00000496822 DLK2Q6UY11 383 aa19.19■□□□□ 0.66
NEK4-206ENST00000496822 PSME4Q14997 1843 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 ZNF609O15014 1411 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 KLRK1P26718 216 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 EPHA10Q5JZY3 1008 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 RBM26Q5T8P6 1007 aaKnown RBP19.18■□□□□ 0.66
NEK4-206ENST00000496822 TXNRD3Q86VQ6 643 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 TLL2Q9Y6L7 1015 aa19.18■□□□□ 0.66
NEK4-206ENST00000496822 FOXN1O15353 648 aa19.17■□□□□ 0.66
NEK4-206ENST00000496822 KIF4BQ2VIQ3 1234 aa19.17■□□□□ 0.66
NEK4-206ENST00000496822 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
NEK4-206ENST00000496822 CDC37L1Q7L3B6 337 aa19.17■□□□□ 0.66
NEK4-206ENST00000496822 ZNF408Q9H9D4 720 aa19.17■□□□□ 0.66
NEK4-206ENST00000496822 ASTN2O75129 1339 aaPredicted RBP19.17■□□□□ 0.66
NEK4-206ENST00000496822 WDR33Q9C0J8 1336 aaKnown RBP19.17■□□□□ 0.66
NEK4-206ENST00000496822 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
NEK4-206ENST00000496822 GRM8O00222 908 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 CYP4F22Q6NT55 531 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 USP48Q86UV5 1035 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 MPHOSPH8Q99549 860 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
NEK4-206ENST00000496822 ZNF646O15015 1829 aaPredicted RBP19.16■□□□□ 0.66
NEK4-206ENST00000496822 ANKRD18BA2A2Z9 1011 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 USP17L3A6NCW0 530 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 USP17L4A6NCW7 530 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 ADM5C9JUS6 153 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 E9PSI1 815 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
NEK4-206ENST00000496822 USP17L1Q7RTZ2 530 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 PODNQ7Z5L7 613 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
NEK4-206ENST00000496822 CAPNS2Q96L46 248 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 GMLQ99445 158 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 LEMD3Q9Y2U8 911 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 ZNF804BA4D1E1 1349 aa19.15■□□□□ 0.66
NEK4-206ENST00000496822 SNAP23O00161 211 aa19.14■□□□□ 0.65
NEK4-206ENST00000496822 ZNF280AP59817 542 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms