RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 MAPK8IP3Q9UPT6 1336 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 GPR25O00155 361 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
SH3D21-204ENST00000496636 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
SH3D21-204ENST00000496636 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
SH3D21-204ENST00000496636 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
SH3D21-204ENST00000496636 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
SH3D21-204ENST00000496636 G3V3G9 751 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 FKTNO75072 461 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 GPSM2P81274 684 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
SH3D21-204ENST00000496636 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
SH3D21-204ENST00000496636 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
SH3D21-204ENST00000496636 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
SH3D21-204ENST00000496636 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
SH3D21-204ENST00000496636 TBC1D8O95759 1140 aa12.68□□□□□ -0.38
SH3D21-204ENST00000496636 NF2P35240 595 aa12.68□□□□□ -0.38
SH3D21-204ENST00000496636 TM4SF4P48230 202 aa12.68□□□□□ -0.38
SH3D21-204ENST00000496636 SCARF1Q14162 830 aa12.68□□□□□ -0.38
SH3D21-204ENST00000496636 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
SH3D21-204ENST00000496636 ALDH1A1P00352 501 aa12.67□□□□□ -0.38
SH3D21-204ENST00000496636 ANXA1P04083 346 aa12.67□□□□□ -0.38
SH3D21-204ENST00000496636 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
SH3D21-204ENST00000496636 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SH3D21-204ENST00000496636 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
SH3D21-204ENST00000496636 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
SH3D21-204ENST00000496636 KCNQ5Q9NR82 932 aa12.67□□□□□ -0.38
SH3D21-204ENST00000496636 UFL1O94874 794 aa12.66□□□□□ -0.38
SH3D21-204ENST00000496636 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
SH3D21-204ENST00000496636 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
SH3D21-204ENST00000496636 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
SH3D21-204ENST00000496636 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
SH3D21-204ENST00000496636 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
SH3D21-204ENST00000496636 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
SH3D21-204ENST00000496636 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
SH3D21-204ENST00000496636 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
SH3D21-204ENST00000496636 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
SH3D21-204ENST00000496636 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
SH3D21-204ENST00000496636 UBE2Q2LH0YL09 131 aa12.64□□□□□ -0.39
SH3D21-204ENST00000496636 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
SH3D21-204ENST00000496636 GMLQ99445 158 aa12.64□□□□□ -0.39
SH3D21-204ENST00000496636 SCN9AQ15858 1988 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 USP17L3A6NCW0 530 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 USP17L4A6NCW7 530 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
SH3D21-204ENST00000496636 MMP14P50281 582 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
SH3D21-204ENST00000496636 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 USP17L1Q7RTZ2 530 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 ARMC9Q7Z3E5 817 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 BRCA2P51587 3418 aa12.63□□□□□ -0.39
SH3D21-204ENST00000496636 XDHP47989 1333 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 CENPFP49454 3210 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
SH3D21-204ENST00000496636 INHBEP58166 350 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
SH3D21-204ENST00000496636 CEP290O15078 2479 aa12.62□□□□□ -0.39
SH3D21-204ENST00000496636 COL1A1P02452 1464 aaPredicted RBP12.61□□□□□ -0.39
SH3D21-204ENST00000496636 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
SH3D21-204ENST00000496636 HOXB7P09629 217 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
SH3D21-204ENST00000496636 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 TAF1P21675 1872 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 COL4A1P02462 1669 aa12.61□□□□□ -0.39
SH3D21-204ENST00000496636 PSME4Q14997 1843 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
SH3D21-204ENST00000496636 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 ARMC5Q96C12 935 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 ERO1AQ96HE7 468 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
SH3D21-204ENST00000496636 TRIOBPQ9H2D6 2365 aa12.6□□□□□ -0.39
SH3D21-204ENST00000496636 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
SH3D21-204ENST00000496636 WNT10BO00744 389 aa12.59□□□□□ -0.39
SH3D21-204ENST00000496636 ZBTB48P10074 688 aaPredicted RBP12.59□□□□□ -0.39
SH3D21-204ENST00000496636 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
SH3D21-204ENST00000496636 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
SH3D21-204ENST00000496636 RIPK4P57078 832 aa12.59□□□□□ -0.39
SH3D21-204ENST00000496636 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
SH3D21-204ENST00000496636 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
SH3D21-204ENST00000496636 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms