RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 CELF2O95319 508 aaKnown RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 TTLL7Q6ZT98 887 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 KSR2Q6VAB6 950 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 ATP6V0A2Q9Y487 856 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 AOC3Q16853 763 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
VPS13B-206ENST00000496144 MAST3O60307 1309 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 KLRG1Q96E93 195 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 SUSD4Q5VX71 490 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 CCDC102AQ96A19 550 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 NBR1Q14596 966 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 TUBGCP6Q96RT7 1819 aa10.44□□□□□ -0.74
VPS13B-206ENST00000496144 RAD17O75943 681 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 KRT26Q7Z3Y9 468 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 CREBZFQ9NS37 354 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 PKD1L3Q7Z443 1732 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 SLC5A1P13866 664 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 DLGAP5Q15398 846 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
VPS13B-206ENST00000496144 SUPT20HL1Q3ZLR7 823 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 METTL22Q9BUU2 404 aaPredicted RBP10.43□□□□□ -0.74
VPS13B-206ENST00000496144 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 SBF2Q86WG5 1849 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 CACNA1FO60840 1977 aa10.43□□□□□ -0.74
VPS13B-206ENST00000496144 SREBF2Q12772 1141 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 ZBTB38Q8NAP3 1195 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-206ENST00000496144 TBC1D32Q96NH3 1257 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 VEZTQ9HBM0 779 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 APOBEC3FQ8IUX4 373 aaKnown RBP10.42□□□□□ -0.74
VPS13B-206ENST00000496144 SIRT2Q8IXJ6 389 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 ANXA1P04083 346 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 LEMD3Q9Y2U8 911 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 METTL24Q5JXM2 366 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 FAM89AQ96GI7 184 aa10.42□□□□□ -0.74
VPS13B-206ENST00000496144 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 PCCAP05165 728 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-206ENST00000496144 USP17L1Q7RTZ2 530 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 NLRP10Q86W26 655 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 ZNF157P51786 506 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-206ENST00000496144 HLFQ16534 295 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 ECE2O60344 883 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 KIF4BQ2VIQ3 1234 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 ZGPATQ8N5A5 531 aaKnown RBP10.41□□□□□ -0.74
VPS13B-206ENST00000496144 CNOT7Q9UIV1 285 aaKnown RBP10.41□□□□□ -0.74
VPS13B-206ENST00000496144 CDHR2Q9BYE9 1310 aa10.41□□□□□ -0.74
VPS13B-206ENST00000496144 UBTFL1P0CB47 393 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 GMPSP49915 693 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 CHAF1AQ13111 956 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
VPS13B-206ENST00000496144 CTDP1Q9Y5B0 961 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
VPS13B-206ENST00000496144 HUNKP57058 714 aa10.4□□□□□ -0.74
VPS13B-206ENST00000496144 TAF1DQ9H5J8 278 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 KCPQ6ZWJ8 1503 aa10.4□□□□□ -0.74
VPS13B-206ENST00000496144 IREB2P48200 963 aaKnown RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 SPTY2D1Q68D10 685 aaPredicted RBP10.4□□□□□ -0.74
VPS13B-206ENST00000496144 SLC4A3P48751 1232 aa10.4□□□□□ -0.75
VPS13B-206ENST00000496144 G3BP1Q13283 466 aaKnown RBP eCLIP10.4□□□□□ -0.75
VPS13B-206ENST00000496144 MICALL2Q8IY33 904 aa10.4□□□□□ -0.75
VPS13B-206ENST00000496144 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.75
VPS13B-206ENST00000496144 CSADQ9Y600 493 aa10.4□□□□□ -0.75
VPS13B-206ENST00000496144 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-206ENST00000496144 CCT4P50991 539 aaKnown RBP10.39□□□□□ -0.75
VPS13B-206ENST00000496144 UBE3BQ7Z3V4 1068 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 USP17L8P0C7I0 530 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 LDHAL6AQ6ZMR3 332 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 ZNF34Q8IZ26 560 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 CCDC85CA6NKD9 419 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 CTSWP56202 376 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
VPS13B-206ENST00000496144 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
VPS13B-206ENST00000496144 PI4KAP2A4QPH2 592 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 PI4KAP1Q8N8J0 262 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 COA1Q9GZY4 146 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 SCN11AQ9UI33 1791 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
VPS13B-206ENST00000496144 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
VPS13B-206ENST00000496144 FLIIQ13045 1269 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 NOGQ13253 232 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 TBC1D10BQ4KMP7 808 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-206ENST00000496144 AKAP2Q9Y2D5 859 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 GSTO1P78417 241 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 GPR101Q96P66 508 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-206ENST00000496144 CEP126Q9P2H0 1117 aa10.38□□□□□ -0.75
VPS13B-206ENST00000496144 MRC1P22897 1456 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms