RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 KIF1BPQ96EK5 621 aa26.94■■□□□ 1.9
ECHDC3-205ENST00000496136 LRRCC1Q9C099 1032 aa26.94■■□□□ 1.9
ECHDC3-205ENST00000496136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.94■■□□□ 1.9
ECHDC3-205ENST00000496136 CNKSR1Q969H4 720 aa26.94■■□□□ 1.9
ECHDC3-205ENST00000496136 MINPP1Q9UNW1 487 aa26.94■■□□□ 1.9
ECHDC3-205ENST00000496136 LRP5O75197 1615 aa26.93■■□□□ 1.9
ECHDC3-205ENST00000496136 NUCB1Q02818 461 aa26.93■■□□□ 1.9
ECHDC3-205ENST00000496136 TFCP2Q12800 502 aa26.93■■□□□ 1.9
ECHDC3-205ENST00000496136 SMARCA5O60264 1052 aaPredicted RBP26.92■■□□□ 1.9
ECHDC3-205ENST00000496136 DLEC1Q9Y238 1755 aa26.92■■□□□ 1.9
ECHDC3-205ENST00000496136 KIAA1551Q9HCM1 1747 aa26.92■■□□□ 1.9
ECHDC3-205ENST00000496136 MROH5Q6ZUA9 1318 aa26.92■■□□□ 1.9
ECHDC3-205ENST00000496136 CEP126Q9P2H0 1117 aa26.92■■□□□ 1.9
ECHDC3-205ENST00000496136 CHRNDQ07001 517 aa26.91■■□□□ 1.9
ECHDC3-205ENST00000496136 METTL24Q5JXM2 366 aa26.91■■□□□ 1.9
ECHDC3-205ENST00000496136 IL1RAPL2Q9NP60 686 aa26.91■■□□□ 1.9
ECHDC3-205ENST00000496136 SLX4Q8IY92 1834 aa26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 PPEF1O14829 653 aaPredicted RBP26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 PRPF40BQ6NWY9 871 aaKnown RBP26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 TMC4Q7Z404 712 aa26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 CHD1LQ86WJ1 897 aa26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 VGLL2Q8N8G2 317 aa26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 HELBQ8NG08 1087 aaPredicted RBP26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 FHDC1Q9C0D6 1143 aaPredicted RBP26.9■■□□□ 1.9
ECHDC3-205ENST00000496136 CACNA1SQ13698 1873 aa26.89■■□□□ 1.9
ECHDC3-205ENST00000496136 SLC51AQ86UW1 340 aa26.89■■□□□ 1.9
ECHDC3-205ENST00000496136 SP8Q8IXZ3 490 aa26.89■■□□□ 1.9
ECHDC3-205ENST00000496136 TTLL6Q8N841 843 aa26.89■■□□□ 1.9
ECHDC3-205ENST00000496136 BCL11AQ9H165 835 aa26.89■■□□□ 1.9
ECHDC3-205ENST00000496136 PDE8BO95263 885 aa26.89■■□□□ 1.89
ECHDC3-205ENST00000496136 LNPKQ9C0E8 428 aa26.89■■□□□ 1.89
ECHDC3-205ENST00000496136 PIM2Q9P1W9 311 aa26.89■■□□□ 1.89
ECHDC3-205ENST00000496136 ATP6V0A2Q9Y487 856 aa26.89■■□□□ 1.89
ECHDC3-205ENST00000496136 SRCAPQ6ZRS2 3230 aa26.88■■□□□ 1.89
ECHDC3-205ENST00000496136 TAF5LO75529 589 aa26.88■■□□□ 1.89
ECHDC3-205ENST00000496136 NLGN2Q8NFZ4 835 aa26.88■■□□□ 1.89
ECHDC3-205ENST00000496136 ZBTB47Q9UFB7 747 aaPredicted RBP26.88■■□□□ 1.89
ECHDC3-205ENST00000496136 CLASRPQ8N2M8 674 aaKnown RBP26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 C7orf43Q8WVR3 580 aa26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 C16orf71Q8IYS4 520 aaPredicted RBP26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 EAF2Q96CJ1 260 aaPredicted RBP26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 ANKRD2Q9GZV1 360 aa26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 GPR108Q9NPR9 543 aa26.86■■□□□ 1.89
ECHDC3-205ENST00000496136 SYT17Q9BSW7 474 aa26.85■■□□□ 1.89
ECHDC3-205ENST00000496136 TNNI3KQ59H18 835 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 OLFM4Q6UX06 510 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 FPGT-TNNI3KV9GXZ4 949 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 SNAP23O00161 211 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 TIMM10P62072 90 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 AKAP2Q9Y2D5 859 aa26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 BRCA1P38398 1863 aaKnown RBP26.84■■□□□ 1.89
ECHDC3-205ENST00000496136 WTIPA6NIX2 430 aaPredicted RBP26.83■■□□□ 1.89
ECHDC3-205ENST00000496136 ANKIB1Q9P2G1 1089 aa26.83■■□□□ 1.89
ECHDC3-205ENST00000496136 NSFL1CQ9UNZ2 370 aaKnown RBP26.83■■□□□ 1.89
ECHDC3-205ENST00000496136 GPSM2P81274 684 aa26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 DALRD3Q5D0E6 543 aaKnown RBP26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 AACSQ86V21 672 aa26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 SKAP1Q86WV1 359 aa26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 TMX4Q9H1E5 349 aaPredicted RBP26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 ZNF219Q9P2Y4 722 aaPredicted RBP26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 WWC3Q9ULE0 1092 aa26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 LRRC37AA6NMS7 1700 aa26.82■■□□□ 1.88
ECHDC3-205ENST00000496136 A0A1B0GUL6 1792 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 FGFR2P21802 821 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 PUM3Q15397 648 aaKnown RBP26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 XDHP47989 1333 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 A0A1B0GUL7 405 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 C21orf2O43822 256 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 PDE4AP27815 886 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 ATP2B3Q16720 1220 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 CCDC8Q9H0W5 538 aaPredicted RBP26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 PODXL2Q9NZ53 605 aa26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 GOLGB1Q14789 3259 aaKnown RBP26.81■■□□□ 1.88
ECHDC3-205ENST00000496136 OTUD7AQ8TE49 926 aaPredicted RBP26.8■■□□□ 1.88
ECHDC3-205ENST00000496136 NEUROD6Q96NK8 337 aa26.8■■□□□ 1.88
ECHDC3-205ENST00000496136 UBE4AQ14139 1066 aa26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 LPIN2Q92539 896 aa26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 IFIT2P09913 472 aaKnown RBP26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 CC2D2BQ6DHV5 1058 aa26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 MPNDQ8N594 471 aa26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 LEMD3Q9Y2U8 911 aa26.79■■□□□ 1.88
ECHDC3-205ENST00000496136 ZNF804BA4D1E1 1349 aa26.78■■□□□ 1.88
ECHDC3-205ENST00000496136 ZNF609O15014 1411 aa26.77■■□□□ 1.88
ECHDC3-205ENST00000496136 TLR7Q9NYK1 1049 aaKnown RBP26.77■■□□□ 1.88
ECHDC3-205ENST00000496136 DBNLQ9UJU6 430 aaKnown RBP26.77■■□□□ 1.88
ECHDC3-205ENST00000496136 DBNDD2Q9BQY9 259 aa26.76■■□□□ 1.88
ECHDC3-205ENST00000496136 POLLQ9UGP5 575 aa26.76■■□□□ 1.88
ECHDC3-205ENST00000496136 BCS1LQ9Y276 419 aa26.76■■□□□ 1.88
ECHDC3-205ENST00000496136 ATP2B4P23634 1241 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 KCNJ4P48050 445 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 TBC1D16Q8TBP0 767 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 XAGE2Q96GT9 111 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 GGA1Q9UJY5 639 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 SALL3Q9BXA9 1300 aa26.76■■□□□ 1.87
ECHDC3-205ENST00000496136 IFIT1P09914 478 aaKnown RBP26.75■■□□□ 1.87
ECHDC3-205ENST00000496136 SLC5A1P13866 664 aa26.75■■□□□ 1.87
ECHDC3-205ENST00000496136 ADORA1P30542 326 aa26.75■■□□□ 1.87
ECHDC3-205ENST00000496136 DPP8Q6V1X1 898 aaPredicted RBP26.75■■□□□ 1.87
ECHDC3-205ENST00000496136 PLEKHM2Q8IWE5 1019 aa26.75■■□□□ 1.87
ECHDC3-205ENST00000496136 LTBP1Q14766 1721 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms