RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CCDC85AQ96PX6 553 aaPredicted RBP30.84■■■□□ 2.53
HLA-C-209ENST00000495835 XDHP47989 1333 aa30.83■■■□□ 2.53
HLA-C-209ENST00000495835 RAD17O75943 681 aa30.83■■■□□ 2.53
HLA-C-209ENST00000495835 GMPSP49915 693 aaPredicted RBP30.83■■■□□ 2.53
HLA-C-209ENST00000495835 RIMBP2O15034 1052 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 CSF1RP07333 972 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 BEND3Q5T5X7 828 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 DPF2Q92785 391 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 BCL2L13Q9BXK5 485 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 GREM2Q9H772 168 aa30.82■■■□□ 2.52
HLA-C-209ENST00000495835 ATP2B4P23634 1241 aa30.81■■■□□ 2.52
HLA-C-209ENST00000495835 UFL1O94874 794 aa30.8■■■□□ 2.52
HLA-C-209ENST00000495835 MAP1SQ66K74 1059 aaPredicted RBP30.8■■■□□ 2.52
HLA-C-209ENST00000495835 DBNDD1Q9H9R9 158 aa30.8■■■□□ 2.52
HLA-C-209ENST00000495835 PCNTO95613 3336 aa30.8■■■□□ 2.52
HLA-C-209ENST00000495835 TMEM88BA6NKF7 163 aa30.79■■■□□ 2.52
HLA-C-209ENST00000495835 ECE2O60344 883 aa30.79■■■□□ 2.52
HLA-C-209ENST00000495835 RPS12P25398 132 aaKnown RBP30.79■■■□□ 2.52
HLA-C-209ENST00000495835 ZC3H15Q8WU90 426 aaKnown RBP30.78■■■□□ 2.52
HLA-C-209ENST00000495835 MINPP1Q9UNW1 487 aa30.78■■■□□ 2.52
HLA-C-209ENST00000495835 F6X3S4 739 aa30.77■■■□□ 2.52
HLA-C-209ENST00000495835 H7C1D1 291 aa30.77■■■□□ 2.52
HLA-C-209ENST00000495835 PSMD14O00487 310 aa30.77■■■□□ 2.52
HLA-C-209ENST00000495835 IGHMBP2P38935 993 aaKnown RBP30.77■■■□□ 2.52
HLA-C-209ENST00000495835 SLFN5Q08AF3 891 aa30.77■■■□□ 2.52
HLA-C-209ENST00000495835 PGAP2Q9UHJ9 254 aa30.77■■■□□ 2.52
HLA-C-209ENST00000495835 CNOT7Q9UIV1 285 aaKnown RBP30.77■■■□□ 2.52
HLA-C-209ENST00000495835 G3V3G9 751 aa30.76■■■□□ 2.51
HLA-C-209ENST00000495835 ALDH1L1O75891 902 aa30.76■■■□□ 2.51
HLA-C-209ENST00000495835 DCAF8Q5TAQ9 597 aa30.76■■■□□ 2.51
HLA-C-209ENST00000495835 ITGA6P23229 1130 aa30.75■■■□□ 2.51
HLA-C-209ENST00000495835 DOK7Q18PE1 504 aa30.75■■■□□ 2.51
HLA-C-209ENST00000495835 VIL1P09327 827 aaKnown RBP30.73■■■□□ 2.51
HLA-C-209ENST00000495835 PODNQ7Z5L7 613 aa30.73■■■□□ 2.51
HLA-C-209ENST00000495835 GRM8O00222 908 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 GPR101Q96P66 508 aaPredicted RBP30.72■■■□□ 2.51
HLA-C-209ENST00000495835 MPHOSPH8Q99549 860 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 SRCIN1Q9C0H9 1055 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 ANKRD2Q9GZV1 360 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 LEMD3Q9Y2U8 911 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 SPEF2Q9C093 1822 aa30.72■■■□□ 2.51
HLA-C-209ENST00000495835 MED23Q9ULK4 1368 aa30.71■■■□□ 2.51
HLA-C-209ENST00000495835 CCT4P50991 539 aaKnown RBP30.71■■■□□ 2.51
HLA-C-209ENST00000495835 FOXO4P98177 505 aa30.71■■■□□ 2.51
HLA-C-209ENST00000495835 MRPL50Q8N5N7 158 aaKnown RBP30.71■■■□□ 2.51
HLA-C-209ENST00000495835 ZBTB12Q9Y330 459 aaPredicted RBP30.71■■■□□ 2.51
HLA-C-209ENST00000495835 ZNF609O15014 1411 aa30.71■■■□□ 2.51
HLA-C-209ENST00000495835 PTPRCP08575 1304 aa30.71■■■□□ 2.51
HLA-C-209ENST00000495835 CNTNAP1P78357 1384 aa30.7■■■□□ 2.51
HLA-C-209ENST00000495835 ANKRD18BA2A2Z9 1011 aa30.7■■■□□ 2.51
HLA-C-209ENST00000495835 FAM161AQ3B820 660 aa30.7■■■□□ 2.51
HLA-C-209ENST00000495835 MICALL2Q8IY33 904 aa30.7■■■□□ 2.51
HLA-C-209ENST00000495835 TRMT2AQ8IZ69 625 aaKnown RBP30.7■■■□□ 2.51
HLA-C-209ENST00000495835 C9orf78Q9NZ63 289 aaPredicted RBP30.7■■■□□ 2.51
HLA-C-209ENST00000495835 PSME4Q14997 1843 aa30.7■■■□□ 2.5
HLA-C-209ENST00000495835 SCN9AQ15858 1988 aa30.69■■■□□ 2.5
HLA-C-209ENST00000495835 KCNQ5Q9NR82 932 aa30.69■■■□□ 2.5
HLA-C-209ENST00000495835 TRPM7Q96QT4 1865 aa30.69■■■□□ 2.5
HLA-C-209ENST00000495835 CT47B1P0C2W7 299 aaPredicted RBP30.68■■■□□ 2.5
HLA-C-209ENST00000495835 HIRAP54198 1017 aaPredicted RBP30.68■■■□□ 2.5
HLA-C-209ENST00000495835 IFIT5Q13325 482 aaKnown RBP30.68■■■□□ 2.5
HLA-C-209ENST00000495835 ALDH1L2Q3SY69 923 aa30.68■■■□□ 2.5
HLA-C-209ENST00000495835 SLC4A10Q6U841 1118 aa30.68■■■□□ 2.5
HLA-C-209ENST00000495835 AGBL3Q8NEM8 1001 aa30.67■■■□□ 2.5
HLA-C-209ENST00000495835 MKRN1Q9UHC7 482 aaKnown RBP30.67■■■□□ 2.5
HLA-C-209ENST00000495835 RASSF10A6NK89 507 aa30.66■■■□□ 2.5
HLA-C-209ENST00000495835 CDC37L1Q7L3B6 337 aa30.65■■■□□ 2.5
HLA-C-209ENST00000495835 TRPM4Q8TD43 1214 aa30.65■■■□□ 2.5
HLA-C-209ENST00000495835 RSBN1LQ6PCB5 846 aaPredicted RBP30.64■■■□□ 2.5
HLA-C-209ENST00000495835 LMBR1LQ6UX01 489 aa30.64■■■□□ 2.5
HLA-C-209ENST00000495835 SSH1Q8WYL5 1049 aa30.64■■■□□ 2.5
HLA-C-209ENST00000495835 COA1Q9GZY4 146 aa30.64■■■□□ 2.5
HLA-C-209ENST00000495835 UTYO14607 1347 aa30.64■■■□□ 2.5
HLA-C-209ENST00000495835 USP17L3A6NCW0 530 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 USP17L4A6NCW7 530 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 DEFB115Q30KQ5 88 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 USP17L1Q7RTZ2 530 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 CDCA7LQ96GN5 454 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 ZNF804BA4D1E1 1349 aa30.63■■■□□ 2.49
HLA-C-209ENST00000495835 CHRNDQ07001 517 aa30.62■■■□□ 2.49
HLA-C-209ENST00000495835 CCDC57Q2TAC2 916 aa30.62■■■□□ 2.49
HLA-C-209ENST00000495835 SHTN1A0MZ66 631 aa30.61■■■□□ 2.49
HLA-C-209ENST00000495835 SAMD7Q7Z3H4 446 aa30.61■■■□□ 2.49
HLA-C-209ENST00000495835 MMP14P50281 582 aa30.6■■■□□ 2.49
HLA-C-209ENST00000495835 CST9Q5W186 159 aa30.6■■■□□ 2.49
HLA-C-209ENST00000495835 GMLQ99445 158 aa30.6■■■□□ 2.49
HLA-C-209ENST00000495835 CHMP3Q9Y3E7 222 aa30.6■■■□□ 2.49
HLA-C-209ENST00000495835 WTIPA6NIX2 430 aaPredicted RBP30.59■■■□□ 2.49
HLA-C-209ENST00000495835 TRAF5O00463 557 aa30.59■■■□□ 2.49
HLA-C-209ENST00000495835 ZNF280AP59817 542 aaPredicted RBP30.59■■■□□ 2.49
HLA-C-209ENST00000495835 TBC1D10BQ4KMP7 808 aaPredicted RBP30.59■■■□□ 2.49
HLA-C-209ENST00000495835 EPHA10Q5JZY3 1008 aa30.59■■■□□ 2.49
HLA-C-209ENST00000495835 ABT1Q9ULW3 272 aaKnown RBP30.59■■■□□ 2.49
HLA-C-209ENST00000495835 MYO3BQ8WXR4 1341 aa30.58■■■□□ 2.49
HLA-C-209ENST00000495835 VEGFBP49765 207 aa30.58■■■□□ 2.49
HLA-C-209ENST00000495835 STRIP1Q5VSL9 837 aa30.58■■■□□ 2.49
HLA-C-209ENST00000495835 C15orf52Q6ZUT6 534 aaKnown RBP30.58■■■□□ 2.49
HLA-C-209ENST00000495835 GLIS2Q9BZE0 524 aaPredicted RBP30.58■■■□□ 2.49
HLA-C-209ENST00000495835 KCNJ4P48050 445 aa30.57■■■□□ 2.48
HLA-C-209ENST00000495835 KIF4BQ2VIQ3 1234 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms