RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 CCDC191Q8NCU4 936 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 SCN9AQ15858 1988 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 FOXN1O15353 648 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 PDE8AO60658 829 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
RFTN1-211ENST00000495666 FKBP5Q13451 457 aaPredicted RBP13.73□□□□□ -0.21
RFTN1-211ENST00000495666 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
RFTN1-211ENST00000495666 CNOT7Q9UIV1 285 aaKnown RBP13.73□□□□□ -0.21
RFTN1-211ENST00000495666 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
RFTN1-211ENST00000495666 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 CTSWP56202 376 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
RFTN1-211ENST00000495666 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 CYP4F22Q6NT55 531 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 EYA3Q99504 573 aa13.72□□□□□ -0.21
RFTN1-211ENST00000495666 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
RFTN1-211ENST00000495666 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
RFTN1-211ENST00000495666 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
RFTN1-211ENST00000495666 H7C1D1 291 aa13.71□□□□□ -0.21
RFTN1-211ENST00000495666 FLIIQ13045 1269 aa13.71□□□□□ -0.21
RFTN1-211ENST00000495666 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
RFTN1-211ENST00000495666 GREM2Q9H772 168 aa13.71□□□□□ -0.21
RFTN1-211ENST00000495666 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
RFTN1-211ENST00000495666 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
RFTN1-211ENST00000495666 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
RFTN1-211ENST00000495666 EGFRP00533 1210 aa13.7□□□□□ -0.22
RFTN1-211ENST00000495666 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
RFTN1-211ENST00000495666 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
RFTN1-211ENST00000495666 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
RFTN1-211ENST00000495666 TSKSQ9UJT2 592 aa13.7□□□□□ -0.22
RFTN1-211ENST00000495666 RTL9Q8NET4 1388 aa13.7□□□□□ -0.22
RFTN1-211ENST00000495666 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
RFTN1-211ENST00000495666 F6X3S4 739 aa13.69□□□□□ -0.22
RFTN1-211ENST00000495666 AOC2O75106 756 aa13.69□□□□□ -0.22
RFTN1-211ENST00000495666 HSP90B1P14625 803 aaKnown RBP13.69□□□□□ -0.22
RFTN1-211ENST00000495666 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
RFTN1-211ENST00000495666 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
RFTN1-211ENST00000495666 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
RFTN1-211ENST00000495666 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
RFTN1-211ENST00000495666 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
RFTN1-211ENST00000495666 CST9Q5W186 159 aa13.68□□□□□ -0.22
RFTN1-211ENST00000495666 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
RFTN1-211ENST00000495666 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
RFTN1-211ENST00000495666 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
RFTN1-211ENST00000495666 ASTN2O75129 1339 aaPredicted RBP13.67□□□□□ -0.22
RFTN1-211ENST00000495666 XDHP47989 1333 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 LBX1P52954 281 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 SLC4A10Q6U841 1118 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 MXD3Q9BW11 206 aa13.67□□□□□ -0.22
RFTN1-211ENST00000495666 IL16Q14005 1332 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 KCNJ4P48050 445 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 KRT26Q7Z3Y9 468 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 GGA3Q9NZ52 723 aa13.66□□□□□ -0.22
RFTN1-211ENST00000495666 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
RFTN1-211ENST00000495666 PSME4Q14997 1843 aa13.65□□□□□ -0.22
RFTN1-211ENST00000495666 ITGA6P23229 1130 aa13.65□□□□□ -0.22
RFTN1-211ENST00000495666 IGHMBP2P38935 993 aaKnown RBP13.65□□□□□ -0.22
RFTN1-211ENST00000495666 GCKRQ14397 625 aa13.65□□□□□ -0.22
RFTN1-211ENST00000495666 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
RFTN1-211ENST00000495666 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
RFTN1-211ENST00000495666 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
RFTN1-211ENST00000495666 PLIN1O60240 522 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 VAMP4O75379 141 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 KLRK1P26718 216 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
RFTN1-211ENST00000495666 CDC37L1Q7L3B6 337 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
RFTN1-211ENST00000495666 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 PODXL2Q9NZ53 605 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 TLL2Q9Y6L7 1015 aa13.64□□□□□ -0.23
RFTN1-211ENST00000495666 SNAP23O00161 211 aa13.63□□□□□ -0.23
RFTN1-211ENST00000495666 ECE1P42892 770 aa13.63□□□□□ -0.23
RFTN1-211ENST00000495666 HUNKP57058 714 aa13.63□□□□□ -0.23
RFTN1-211ENST00000495666 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
RFTN1-211ENST00000495666 H7C1W4 665 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 TAF5LO75529 589 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 RPS12P25398 132 aaKnown RBP13.62□□□□□ -0.23
RFTN1-211ENST00000495666 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
RFTN1-211ENST00000495666 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 ANGEL2Q5VTE6 544 aaKnown RBP13.62□□□□□ -0.23
RFTN1-211ENST00000495666 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
RFTN1-211ENST00000495666 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 SULF1Q8IWU6 871 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 DPF2Q92785 391 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms