RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 DOK7Q18PE1 504 aa22.83■■□□□ 1.25
TMEM53-209ENST00000495630 RBM26Q5T8P6 1007 aaKnown RBP22.83■■□□□ 1.25
TMEM53-209ENST00000495630 FAM155AB1AL88 458 aaPredicted RBP22.82■■□□□ 1.24
TMEM53-209ENST00000495630 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
TMEM53-209ENST00000495630 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
TMEM53-209ENST00000495630 PODXL2Q9NZ53 605 aa22.82■■□□□ 1.24
TMEM53-209ENST00000495630 DUSP27Q5VZP5 1158 aa22.81■■□□□ 1.24
TMEM53-209ENST00000495630 ZBTB38Q8NAP3 1195 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-209ENST00000495630 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
TMEM53-209ENST00000495630 SAGE1Q9NXZ1 904 aa22.8■■□□□ 1.24
TMEM53-209ENST00000495630 TAF1P21675 1872 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 G3V3G9 751 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 ZNF157P51786 506 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-209ENST00000495630 KIF23Q02241 960 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-209ENST00000495630 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
TMEM53-209ENST00000495630 KIF4BQ2VIQ3 1234 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 DCAF8Q5TAQ9 597 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 RIC3Q7Z5B4 369 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 SULF1Q8IWU6 871 aa22.79■■□□□ 1.24
TMEM53-209ENST00000495630 MYBBP1AQ9BQG0 1328 aaKnown RBP22.79■■□□□ 1.24
TMEM53-209ENST00000495630 LRRC37AA6NMS7 1700 aa22.78■■□□□ 1.24
TMEM53-209ENST00000495630 ADM5C9JUS6 153 aa22.78■■□□□ 1.24
TMEM53-209ENST00000495630 CASP8AP2Q9UKL3 1982 aa22.78■■□□□ 1.24
TMEM53-209ENST00000495630 ANKIB1Q9P2G1 1089 aa22.77■■□□□ 1.24
TMEM53-209ENST00000495630 ADAMTS8Q9UP79 889 aa22.77■■□□□ 1.24
TMEM53-209ENST00000495630 GOLGA2Q08379 1002 aa22.76■■□□□ 1.23
TMEM53-209ENST00000495630 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
TMEM53-209ENST00000495630 SEC31BQ9NQW1 1179 aa22.76■■□□□ 1.23
TMEM53-209ENST00000495630 GGA1Q9UJY5 639 aa22.76■■□□□ 1.23
TMEM53-209ENST00000495630 UFL1O94874 794 aa22.75■■□□□ 1.23
TMEM53-209ENST00000495630 ZNF280AP59817 542 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-209ENST00000495630 CCDC152Q4G0S7 254 aa22.75■■□□□ 1.23
TMEM53-209ENST00000495630 REM2Q8IYK8 340 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-209ENST00000495630 CCDC191Q8NCU4 936 aa22.75■■□□□ 1.23
TMEM53-209ENST00000495630 MBIPQ9NS73 344 aa22.75■■□□□ 1.23
TMEM53-209ENST00000495630 RNF186Q9NXI6 227 aa22.75■■□□□ 1.23
TMEM53-209ENST00000495630 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
TMEM53-209ENST00000495630 ZNF853P0CG23 659 aa22.74■■□□□ 1.23
TMEM53-209ENST00000495630 RSBN1LQ6PCB5 846 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-209ENST00000495630 CSRNP1Q96S65 589 aa22.74■■□□□ 1.23
TMEM53-209ENST00000495630 GGA3Q9NZ52 723 aa22.74■■□□□ 1.23
TMEM53-209ENST00000495630 PDE8AO60658 829 aa22.73■■□□□ 1.23
TMEM53-209ENST00000495630 TRPA1O75762 1119 aa22.73■■□□□ 1.23
TMEM53-209ENST00000495630 PCCAP05165 728 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-209ENST00000495630 SLC10A3P09131 477 aa22.73■■□□□ 1.23
TMEM53-209ENST00000495630 SCARF1Q14162 830 aa22.73■■□□□ 1.23
TMEM53-209ENST00000495630 CDCA5Q96FF9 252 aa22.73■■□□□ 1.23
TMEM53-209ENST00000495630 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
TMEM53-209ENST00000495630 MYD88Q99836 296 aa22.72■■□□□ 1.23
TMEM53-209ENST00000495630 POLR2AP24928 1970 aaKnown RBP22.71■■□□□ 1.23
TMEM53-209ENST00000495630 FKBP1BP68106 108 aa22.71■■□□□ 1.23
TMEM53-209ENST00000495630 DDX10Q13206 875 aaKnown RBP22.71■■□□□ 1.23
TMEM53-209ENST00000495630 GMLQ99445 158 aa22.71■■□□□ 1.23
TMEM53-209ENST00000495630 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
TMEM53-209ENST00000495630 ASTN2O75129 1339 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-209ENST00000495630 ANGEL2Q5VTE6 544 aaKnown RBP22.7■■□□□ 1.22
TMEM53-209ENST00000495630 PODNQ7Z5L7 613 aa22.7■■□□□ 1.22
TMEM53-209ENST00000495630 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
TMEM53-209ENST00000495630 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
TMEM53-209ENST00000495630 ZNF609O15014 1411 aa22.7■■□□□ 1.22
TMEM53-209ENST00000495630 COL4A1P02462 1669 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 XDHP47989 1333 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 USP17L8P0C7I0 530 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 ATP2B4P23634 1241 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 GNAI1P63096 354 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 CALD1Q05682 793 aaKnown RBP22.69■■□□□ 1.22
TMEM53-209ENST00000495630 IFT57Q9NWB7 429 aa22.69■■□□□ 1.22
TMEM53-209ENST00000495630 PITPNM2Q9BZ72 1349 aa22.68■■□□□ 1.22
TMEM53-209ENST00000495630 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
TMEM53-209ENST00000495630 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
TMEM53-209ENST00000495630 ELL2O00472 640 aaPredicted RBP22.68■■□□□ 1.22
TMEM53-209ENST00000495630 DDX58O95786 925 aaKnown RBP22.68■■□□□ 1.22
TMEM53-209ENST00000495630 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
TMEM53-209ENST00000495630 METTL22Q9BUU2 404 aaPredicted RBP22.68■■□□□ 1.22
TMEM53-209ENST00000495630 MYOZ2Q9NPC6 264 aa22.68■■□□□ 1.22
TMEM53-209ENST00000495630 JARID2Q92833 1246 aaPredicted RBP22.67■■□□□ 1.22
TMEM53-209ENST00000495630 RASAL3Q86YV0 1011 aa22.66■■□□□ 1.22
TMEM53-209ENST00000495630 CCDC85AQ96PX6 553 aaPredicted RBP22.66■■□□□ 1.22
TMEM53-209ENST00000495630 CCDC30Q5VVM6 783 aa22.65■■□□□ 1.22
TMEM53-209ENST00000495630 CTU1Q7Z7A3 348 aaKnown RBP22.65■■□□□ 1.22
TMEM53-209ENST00000495630 CDC5LQ99459 802 aaKnown RBP22.65■■□□□ 1.22
TMEM53-209ENST00000495630 APAF1O14727 1248 aa22.64■■□□□ 1.21
TMEM53-209ENST00000495630 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.21
TMEM53-209ENST00000495630 SCN9AQ15858 1988 aa22.63■■□□□ 1.21
TMEM53-209ENST00000495630 BSDC1Q9NW68 430 aaPredicted RBP22.63■■□□□ 1.21
TMEM53-209ENST00000495630 MMP14P50281 582 aa22.62■■□□□ 1.21
TMEM53-209ENST00000495630 TTLL11Q8NHH1 800 aa22.62■■□□□ 1.21
TMEM53-209ENST00000495630 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
TMEM53-209ENST00000495630 MAP3K2Q9Y2U5 619 aa22.62■■□□□ 1.21
TMEM53-209ENST00000495630 CTSWP56202 376 aa22.61■■□□□ 1.21
TMEM53-209ENST00000495630 PKN2Q16513 984 aaKnown RBP22.61■■□□□ 1.21
TMEM53-209ENST00000495630 KSR2Q6VAB6 950 aa22.61■■□□□ 1.21
TMEM53-209ENST00000495630 OGFOD1Q8N543 542 aa22.61■■□□□ 1.21
TMEM53-209ENST00000495630 UBE2Q2LH0YL09 131 aa22.6■■□□□ 1.21
TMEM53-209ENST00000495630 NBPF9Q3BBW0 867 aa22.6■■□□□ 1.21
TMEM53-209ENST00000495630 PCDH10Q9P2E7 1040 aa22.6■■□□□ 1.21
TMEM53-209ENST00000495630 WTIPA6NIX2 430 aaPredicted RBP22.59■■□□□ 1.21
TMEM53-209ENST00000495630 TM4SF4P48230 202 aa22.59■■□□□ 1.21
TMEM53-209ENST00000495630 SOX10P56693 466 aa22.59■■□□□ 1.21
TMEM53-209ENST00000495630 DACT2Q5SW24 774 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms