RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 ANKRD18BA2A2Z9 1011 aa14.02□□□□□ -0.17
POLR2B-210ENST00000495311 RFX5P48382 616 aaPredicted RBP14.02□□□□□ -0.17
POLR2B-210ENST00000495311 POLA2Q14181 598 aa14.02□□□□□ -0.17
POLR2B-210ENST00000495311 CC2D2BQ6DHV5 1058 aa14.02□□□□□ -0.17
POLR2B-210ENST00000495311 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.17
POLR2B-210ENST00000495311 SSH3Q8TE77 659 aa14.02□□□□□ -0.17
POLR2B-210ENST00000495311 ZNF622Q969S3 477 aaKnown RBP eCLIP14.02□□□□□ -0.17
POLR2B-210ENST00000495311 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.17
POLR2B-210ENST00000495311 BSDC1Q9NW68 430 aaPredicted RBP14.02□□□□□ -0.17
POLR2B-210ENST00000495311 FAM161AQ3B820 660 aa14.01□□□□□ -0.17
POLR2B-210ENST00000495311 PRPF40BQ6NWY9 871 aaKnown RBP14.01□□□□□ -0.17
POLR2B-210ENST00000495311 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
POLR2B-210ENST00000495311 SP8Q8IXZ3 490 aa14.01□□□□□ -0.17
POLR2B-210ENST00000495311 CELF1Q92879 486 aaKnown RBP14.01□□□□□ -0.17
POLR2B-210ENST00000495311 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
POLR2B-210ENST00000495311 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
POLR2B-210ENST00000495311 POTEIP0CG38 1075 aa14□□□□□ -0.17
POLR2B-210ENST00000495311 POTEJP0CG39 1038 aa14□□□□□ -0.17
POLR2B-210ENST00000495311 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
POLR2B-210ENST00000495311 ANKRD18AQ8IVF6 992 aa14□□□□□ -0.17
POLR2B-210ENST00000495311 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
POLR2B-210ENST00000495311 SRGAP3O43295 1099 aa13.99□□□□□ -0.17
POLR2B-210ENST00000495311 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
POLR2B-210ENST00000495311 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
POLR2B-210ENST00000495311 SIRT2Q8IXJ6 389 aa13.99□□□□□ -0.17
POLR2B-210ENST00000495311 NOP58Q9Y2X3 529 aaKnown RBP13.99□□□□□ -0.17
POLR2B-210ENST00000495311 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
POLR2B-210ENST00000495311 SNED1Q8TER0 1413 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
POLR2B-210ENST00000495311 CIAO1O76071 339 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 HSPA1AP0DMV8 641 aaKnown RBP13.98□□□□□ -0.17
POLR2B-210ENST00000495311 HSPA1BP0DMV9 641 aaKnown RBP13.98□□□□□ -0.17
POLR2B-210ENST00000495311 IGHMBP2P38935 993 aaKnown RBP13.98□□□□□ -0.17
POLR2B-210ENST00000495311 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
POLR2B-210ENST00000495311 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 MINPP1Q9UNW1 487 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 LTBP1Q14766 1721 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 COL4A5P29400 1685 aa13.98□□□□□ -0.17
POLR2B-210ENST00000495311 LDHAL6AQ6ZMR3 332 aa13.97□□□□□ -0.17
POLR2B-210ENST00000495311 RTKN2Q8IZC4 609 aa13.97□□□□□ -0.17
POLR2B-210ENST00000495311 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
POLR2B-210ENST00000495311 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
POLR2B-210ENST00000495311 PCDHB15Q9Y5E8 787 aa13.97□□□□□ -0.17
POLR2B-210ENST00000495311 LTBP3Q9NS15 1303 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 MYH3P11055 1940 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 C21orf2O43822 256 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 HMMRO75330 724 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 RTFDC1Q9BY42 306 aaPredicted RBP13.96□□□□□ -0.17
POLR2B-210ENST00000495311 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
POLR2B-210ENST00000495311 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 EYA2O00167 538 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 CAPN15O75808 1086 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
POLR2B-210ENST00000495311 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 ZNF594Q96JF6 807 aaPredicted RBP13.95□□□□□ -0.18
POLR2B-210ENST00000495311 PSMD1Q99460 953 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 ANKRD2Q9GZV1 360 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
POLR2B-210ENST00000495311 VPS33BQ9H267 617 aa13.95□□□□□ -0.18
POLR2B-210ENST00000495311 MROH5Q6ZUA9 1318 aa13.94□□□□□ -0.18
POLR2B-210ENST00000495311 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
POLR2B-210ENST00000495311 CCDC93Q567U6 631 aa13.94□□□□□ -0.18
POLR2B-210ENST00000495311 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
POLR2B-210ENST00000495311 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
POLR2B-210ENST00000495311 PASKQ96RG2 1323 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 CHRNDQ07001 517 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 LRRC24Q50LG9 513 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 VGLL2Q8N8G2 317 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
POLR2B-210ENST00000495311 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
POLR2B-210ENST00000495311 LEMD3Q9Y2U8 911 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 COL4A1P02462 1669 aa13.93□□□□□ -0.18
POLR2B-210ENST00000495311 XDHP47989 1333 aa13.92□□□□□ -0.18
POLR2B-210ENST00000495311 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
POLR2B-210ENST00000495311 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
POLR2B-210ENST00000495311 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
POLR2B-210ENST00000495311 FKBP4Q02790 459 aaKnown RBP eCLIP13.92□□□□□ -0.18
POLR2B-210ENST00000495311 C15orf52Q6ZUT6 534 aaKnown RBP13.92□□□□□ -0.18
POLR2B-210ENST00000495311 MPNDQ8N594 471 aa13.92□□□□□ -0.18
POLR2B-210ENST00000495311 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 ZBTB22O15209 634 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 RAB11FIP3O75154 756 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 SURF6O75683 361 aaKnown RBP13.91□□□□□ -0.18
POLR2B-210ENST00000495311 PDE8BO95263 885 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 GPSM2P81274 684 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 G3BP1Q13283 466 aaKnown RBP eCLIP13.91□□□□□ -0.18
POLR2B-210ENST00000495311 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 CEP126Q9P2H0 1117 aa13.91□□□□□ -0.18
POLR2B-210ENST00000495311 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms