RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CASP7P55210 303 aa13.56□□□□□ -0.24
NELFE-213ENST00000494956 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
NELFE-213ENST00000494956 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
NELFE-213ENST00000494956 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
NELFE-213ENST00000494956 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
NELFE-213ENST00000494956 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
NELFE-213ENST00000494956 UFL1O94874 794 aa13.55□□□□□ -0.24
NELFE-213ENST00000494956 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
NELFE-213ENST00000494956 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
NELFE-213ENST00000494956 ANKIB1Q9P2G1 1089 aa13.55□□□□□ -0.24
NELFE-213ENST00000494956 PSMD14O00487 310 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 ECE2O60344 883 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
NELFE-213ENST00000494956 HSP90B1P14625 803 aaKnown RBP13.53□□□□□ -0.24
NELFE-213ENST00000494956 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
NELFE-213ENST00000494956 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
NELFE-213ENST00000494956 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
NELFE-213ENST00000494956 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
NELFE-213ENST00000494956 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
NELFE-213ENST00000494956 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
NELFE-213ENST00000494956 TRAF5O00463 557 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
NELFE-213ENST00000494956 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.25
NELFE-213ENST00000494956 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 EPHA10Q5JZY3 1008 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 SLC4A10Q6U841 1118 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
NELFE-213ENST00000494956 EGFRP00533 1210 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 ITGA6P23229 1130 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 FOXO4P98177 505 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 TNIP1Q15025 636 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 EYA3Q99504 573 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
NELFE-213ENST00000494956 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
NELFE-213ENST00000494956 XDHP47989 1333 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 E9PSI1 815 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 SNAP23O00161 211 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 CSF1RP07333 972 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 DLK2Q6UY11 383 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
NELFE-213ENST00000494956 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 SSH1Q8WYL5 1049 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
NELFE-213ENST00000494956 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 PSME4Q14997 1843 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
NELFE-213ENST00000494956 TMEM88BA6NKF7 163 aa13.49□□□□□ -0.25
NELFE-213ENST00000494956 CCER2I3L3R5 266 aa13.49□□□□□ -0.25
NELFE-213ENST00000494956 KLRK1P26718 216 aa13.49□□□□□ -0.25
NELFE-213ENST00000494956 RBM26Q5T8P6 1007 aaKnown RBP13.49□□□□□ -0.25
NELFE-213ENST00000494956 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
NELFE-213ENST00000494956 ZNF646O15015 1829 aaPredicted RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 G3V3G9 751 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 MIER1Q8N108 512 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 MXD3Q9BW11 206 aa13.48□□□□□ -0.25
NELFE-213ENST00000494956 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
NELFE-213ENST00000494956 GRM8O00222 908 aa13.47□□□□□ -0.25
NELFE-213ENST00000494956 TAF5LO75529 589 aa13.47□□□□□ -0.25
NELFE-213ENST00000494956 LMBR1LQ6UX01 489 aa13.47□□□□□ -0.25
NELFE-213ENST00000494956 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
NELFE-213ENST00000494956 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
NELFE-213ENST00000494956 CNTNAP1P78357 1384 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
NELFE-213ENST00000494956 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 H7C1D1 291 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
NELFE-213ENST00000494956 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
NELFE-213ENST00000494956 CHRNDQ07001 517 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 CST9Q5W186 159 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
NELFE-213ENST00000494956 KAZALD1Q96I82 304 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 MPHOSPH8Q99549 860 aa13.46□□□□□ -0.25
NELFE-213ENST00000494956 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
NELFE-213ENST00000494956 VEGFBP49765 207 aa13.45□□□□□ -0.26
NELFE-213ENST00000494956 DPF2Q92785 391 aa13.45□□□□□ -0.26
NELFE-213ENST00000494956 FBXW7Q969H0 707 aa13.45□□□□□ -0.26
NELFE-213ENST00000494956 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
NELFE-213ENST00000494956 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms