RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
SCAP-213ENST00000494938 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
SCAP-213ENST00000494938 GJA3Q9Y6H8 435 aa18.13■□□□□ 0.49
SCAP-213ENST00000494938 UFL1O94874 794 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 DOK7Q18PE1 504 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 RABL6Q3YEC7 729 aaPredicted RBP18.12■□□□□ 0.49
SCAP-213ENST00000494938 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
SCAP-213ENST00000494938 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 EYA3Q99504 573 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
SCAP-213ENST00000494938 BICC1Q9H694 974 aaKnown RBP18.12■□□□□ 0.49
SCAP-213ENST00000494938 CHMP3Q9Y3E7 222 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 XDHP47989 1333 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 DUOX1Q9NRD9 1551 aa18.12■□□□□ 0.49
SCAP-213ENST00000494938 RAD17O75943 681 aa18.11■□□□□ 0.49
SCAP-213ENST00000494938 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
SCAP-213ENST00000494938 TAF1DQ9H5J8 278 aaPredicted RBP18.11■□□□□ 0.49
SCAP-213ENST00000494938 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
SCAP-213ENST00000494938 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
SCAP-213ENST00000494938 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
SCAP-213ENST00000494938 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
SCAP-213ENST00000494938 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
SCAP-213ENST00000494938 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
SCAP-213ENST00000494938 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
SCAP-213ENST00000494938 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
SCAP-213ENST00000494938 IQCA1LA6NCM1 817 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 POTEJP0CG39 1038 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 TRIM27P14373 513 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 SCNN1DP51172 638 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 CHRNDQ07001 517 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 CIAPIN1Q6FI81 312 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 ATF7IPQ6VMQ6 1270 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
SCAP-213ENST00000494938 ANKRD2Q9GZV1 360 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 LEMD3Q9Y2U8 911 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
SCAP-213ENST00000494938 LRRC37AA6NMS7 1700 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
SCAP-213ENST00000494938 FSTL1Q12841 308 aa18.08■□□□□ 0.48
SCAP-213ENST00000494938 TNIP1Q15025 636 aa18.08■□□□□ 0.48
SCAP-213ENST00000494938 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.48
SCAP-213ENST00000494938 WDR90Q96KV7 1748 aa18.08■□□□□ 0.48
SCAP-213ENST00000494938 SNAP23O00161 211 aa18.07■□□□□ 0.48
SCAP-213ENST00000494938 ECE2O60344 883 aa18.07■□□□□ 0.48
SCAP-213ENST00000494938 EPHX2P34913 555 aa18.07■□□□□ 0.48
SCAP-213ENST00000494938 EPS15P42566 896 aa18.07■□□□□ 0.48
SCAP-213ENST00000494938 TXNRD3Q86VQ6 643 aa18.07■□□□□ 0.48
SCAP-213ENST00000494938 HELBQ8NG08 1087 aaPredicted RBP18.07■□□□□ 0.48
SCAP-213ENST00000494938 PUS3Q9BZE2 481 aaKnown RBP18.07■□□□□ 0.48
SCAP-213ENST00000494938 TAF5LO75529 589 aa18.06■□□□□ 0.48
SCAP-213ENST00000494938 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
SCAP-213ENST00000494938 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
SCAP-213ENST00000494938 SMC1BQ8NDV3 1235 aa18.06■□□□□ 0.48
SCAP-213ENST00000494938 RIPOR2Q9Y4F9 1068 aa18.06■□□□□ 0.48
SCAP-213ENST00000494938 ZNF804BA4D1E1 1349 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 PSMD14O00487 310 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 HSPA6P17066 643 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 MEIS3Q99687 375 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 GPRC5DQ9NZD1 345 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
SCAP-213ENST00000494938 IRS2Q9Y4H2 1338 aa18.04■□□□□ 0.48
SCAP-213ENST00000494938 VIL1P09327 827 aaKnown RBP18.04■□□□□ 0.48
SCAP-213ENST00000494938 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
SCAP-213ENST00000494938 KLRK1P26718 216 aa18.04■□□□□ 0.48
SCAP-213ENST00000494938 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
SCAP-213ENST00000494938 CNNM1Q9NRU3 951 aa18.04■□□□□ 0.48
SCAP-213ENST00000494938 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
SCAP-213ENST00000494938 CEP350Q5VT06 3117 aa18.04■□□□□ 0.48
SCAP-213ENST00000494938 G3V3G9 751 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 PODNQ7Z5L7 613 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 PNMA8AQ86V59 439 aaPredicted RBP18.03■□□□□ 0.48
SCAP-213ENST00000494938 LDHDQ86WU2 507 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 KLHDC4Q8TBB5 520 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 LRRFIP2Q9Y608 721 aaKnown RBP18.03■□□□□ 0.48
SCAP-213ENST00000494938 MED23Q9ULK4 1368 aa18.03■□□□□ 0.48
SCAP-213ENST00000494938 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
SCAP-213ENST00000494938 PLIN1O60240 522 aa18.02■□□□□ 0.48
SCAP-213ENST00000494938 LMOD1P29536 600 aaPredicted RBP18.02■□□□□ 0.48
SCAP-213ENST00000494938 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
SCAP-213ENST00000494938 EAPPQ56P03 285 aaPredicted RBP18.02■□□□□ 0.48
SCAP-213ENST00000494938 C15orf52Q6ZUT6 534 aaKnown RBP18.02■□□□□ 0.48
SCAP-213ENST00000494938 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
SCAP-213ENST00000494938 DPF2Q92785 391 aa18.02■□□□□ 0.48
SCAP-213ENST00000494938 CNOT7Q9UIV1 285 aaKnown RBP18.02■□□□□ 0.48
SCAP-213ENST00000494938 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
SCAP-213ENST00000494938 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
SCAP-213ENST00000494938 ADARB2Q9NS39 739 aaKnown RBP18.01■□□□□ 0.47
SCAP-213ENST00000494938 GNAI3P08754 354 aa18■□□□□ 0.47
SCAP-213ENST00000494938 RLBP1P12271 317 aa18■□□□□ 0.47
SCAP-213ENST00000494938 KCNJ4P48050 445 aa18■□□□□ 0.47
SCAP-213ENST00000494938 USP50Q70EL3 339 aaPredicted RBP18■□□□□ 0.47
SCAP-213ENST00000494938 HDAC5Q9UQL6 1122 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms