RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 EPS15P42566 896 aa22.82■■□□□ 1.24
COL20A1-207ENST00000494913 DBNDD1Q9H9R9 158 aa22.82■■□□□ 1.24
COL20A1-207ENST00000494913 BSDC1Q9NW68 430 aaPredicted RBP22.82■■□□□ 1.24
COL20A1-207ENST00000494913 CSF1RP07333 972 aa22.81■■□□□ 1.24
COL20A1-207ENST00000494913 TNIP1Q15025 636 aa22.81■■□□□ 1.24
COL20A1-207ENST00000494913 BCL2L13Q9BXK5 485 aa22.81■■□□□ 1.24
COL20A1-207ENST00000494913 ZC3H12CQ9C0D7 883 aaKnown RBP22.81■■□□□ 1.24
COL20A1-207ENST00000494913 SRCIN1Q9C0H9 1055 aa22.81■■□□□ 1.24
COL20A1-207ENST00000494913 GRM8O00222 908 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 ALDH1L1O75891 902 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 ITGA6P23229 1130 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 DOK7Q18PE1 504 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 FAM161AQ3B820 660 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 C9orf78Q9NZ63 289 aaPredicted RBP22.8■■□□□ 1.24
COL20A1-207ENST00000494913 XDHP47989 1333 aa22.8■■□□□ 1.24
COL20A1-207ENST00000494913 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
COL20A1-207ENST00000494913 MINPP1Q9UNW1 487 aa22.79■■□□□ 1.24
COL20A1-207ENST00000494913 LTBP1Q14766 1721 aa22.79■■□□□ 1.24
COL20A1-207ENST00000494913 GMPSP49915 693 aaPredicted RBP22.79■■□□□ 1.24
COL20A1-207ENST00000494913 FOXO4P98177 505 aa22.79■■□□□ 1.24
COL20A1-207ENST00000494913 DNAJC5GQ8N7S2 189 aa22.79■■□□□ 1.24
COL20A1-207ENST00000494913 GPRC5DQ9NZD1 345 aa22.79■■□□□ 1.24
COL20A1-207ENST00000494913 ECE2O60344 883 aa22.78■■□□□ 1.24
COL20A1-207ENST00000494913 ALDH1L2Q3SY69 923 aa22.78■■□□□ 1.24
COL20A1-207ENST00000494913 PTPRCP08575 1304 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 G3V3G9 751 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 ATP2B4P23634 1241 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 DCAF8Q5TAQ9 597 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 MPHOSPH8Q99549 860 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 KCNQ5Q9NR82 932 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 SMC4Q9NTJ3 1288 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 CHMP3Q9Y3E7 222 aa22.77■■□□□ 1.24
COL20A1-207ENST00000494913 ANKRD18BA2A2Z9 1011 aa22.76■■□□□ 1.23
COL20A1-207ENST00000494913 WTIPA6NIX2 430 aaPredicted RBP22.76■■□□□ 1.23
COL20A1-207ENST00000494913 PSMD14O00487 310 aa22.76■■□□□ 1.23
COL20A1-207ENST00000494913 EPHA10Q5JZY3 1008 aa22.76■■□□□ 1.23
COL20A1-207ENST00000494913 CT47B1P0C2W7 299 aaPredicted RBP22.75■■□□□ 1.23
COL20A1-207ENST00000494913 IFIT5Q13325 482 aaKnown RBP22.75■■□□□ 1.23
COL20A1-207ENST00000494913 MAP1SQ66K74 1059 aaPredicted RBP22.75■■□□□ 1.23
COL20A1-207ENST00000494913 LMBR1LQ6UX01 489 aa22.75■■□□□ 1.23
COL20A1-207ENST00000494913 USP50Q70EL3 339 aaPredicted RBP22.75■■□□□ 1.23
COL20A1-207ENST00000494913 CNTROBQ8N137 903 aa22.74■■□□□ 1.23
COL20A1-207ENST00000494913 ADARB2Q9NS39 739 aaKnown RBP22.74■■□□□ 1.23
COL20A1-207ENST00000494913 ZBTB12Q9Y330 459 aaPredicted RBP22.74■■□□□ 1.23
COL20A1-207ENST00000494913 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
COL20A1-207ENST00000494913 ITGBL1O95965 494 aaPredicted RBP22.73■■□□□ 1.23
COL20A1-207ENST00000494913 CCT4P50991 539 aaKnown RBP22.73■■□□□ 1.23
COL20A1-207ENST00000494913 CNOT7Q9UIV1 285 aaKnown RBP22.73■■□□□ 1.23
COL20A1-207ENST00000494913 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
COL20A1-207ENST00000494913 ADAMTSL1Q8N6G6 1762 aa22.72■■□□□ 1.23
COL20A1-207ENST00000494913 SUCLG2Q96I99 432 aa22.72■■□□□ 1.23
COL20A1-207ENST00000494913 ANKRD2Q9GZV1 360 aa22.72■■□□□ 1.23
COL20A1-207ENST00000494913 PASKQ96RG2 1323 aa22.72■■□□□ 1.23
COL20A1-207ENST00000494913 CCDC57Q2TAC2 916 aa22.71■■□□□ 1.23
COL20A1-207ENST00000494913 DPF2Q92785 391 aa22.71■■□□□ 1.23
COL20A1-207ENST00000494913 KLRG1Q96E93 195 aa22.71■■□□□ 1.23
COL20A1-207ENST00000494913 UTYO14607 1347 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 SHTN1A0MZ66 631 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 H7C1D1 291 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
COL20A1-207ENST00000494913 CHRNDQ07001 517 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 MICALL2Q8IY33 904 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 LEMD3Q9Y2U8 911 aa22.7■■□□□ 1.22
COL20A1-207ENST00000494913 KAZALD1Q96I82 304 aa22.69■■□□□ 1.22
COL20A1-207ENST00000494913 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
COL20A1-207ENST00000494913 NOB1Q9ULX3 412 aaKnown RBP22.69■■□□□ 1.22
COL20A1-207ENST00000494913 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
COL20A1-207ENST00000494913 VIL1P09327 827 aaKnown RBP22.68■■□□□ 1.22
COL20A1-207ENST00000494913 RPS12P25398 132 aaKnown RBP22.68■■□□□ 1.22
COL20A1-207ENST00000494913 TAF7LQ5H9L4 462 aa22.68■■□□□ 1.22
COL20A1-207ENST00000494913 ZNF594Q96JF6 807 aaPredicted RBP22.68■■□□□ 1.22
COL20A1-207ENST00000494913 MED23Q9ULK4 1368 aa22.68■■□□□ 1.22
COL20A1-207ENST00000494913 KCNJ4P48050 445 aa22.67■■□□□ 1.22
COL20A1-207ENST00000494913 RARSP54136 660 aaKnown RBP22.67■■□□□ 1.22
COL20A1-207ENST00000494913 HIRAP54198 1017 aaPredicted RBP22.67■■□□□ 1.22
COL20A1-207ENST00000494913 PODNQ7Z5L7 613 aa22.67■■□□□ 1.22
COL20A1-207ENST00000494913 HELBQ8NG08 1087 aaPredicted RBP22.67■■□□□ 1.22
COL20A1-207ENST00000494913 SCN9AQ15858 1988 aa22.67■■□□□ 1.22
COL20A1-207ENST00000494913 LDHAL6AQ6ZMR3 332 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 TXNRD3Q86VQ6 643 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 TRPM4Q8TD43 1214 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 USP44Q9H0E7 712 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 TAF5LO75529 589 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 BRPF1P55201 1214 aaPredicted RBP22.66■■□□□ 1.22
COL20A1-207ENST00000494913 SAMD7Q7Z3H4 446 aa22.66■■□□□ 1.22
COL20A1-207ENST00000494913 BICC1Q9H694 974 aaKnown RBP22.66■■□□□ 1.22
COL20A1-207ENST00000494913 TMEM88BA6NKF7 163 aa22.65■■□□□ 1.22
COL20A1-207ENST00000494913 KLRK1P26718 216 aa22.65■■□□□ 1.22
COL20A1-207ENST00000494913 CNNM1Q9NRU3 951 aa22.65■■□□□ 1.22
COL20A1-207ENST00000494913 USP17L3A6NCW0 530 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 USP17L4A6NCW7 530 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 SNAP23O00161 211 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 TBC1D10BQ4KMP7 808 aaPredicted RBP22.64■■□□□ 1.21
COL20A1-207ENST00000494913 RSBN1LQ6PCB5 846 aaPredicted RBP22.64■■□□□ 1.21
COL20A1-207ENST00000494913 USP17L1Q7RTZ2 530 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 COA1Q9GZY4 146 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 PGAP2Q9UHJ9 254 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 PCNTO95613 3336 aa22.64■■□□□ 1.21
COL20A1-207ENST00000494913 PLIN1O60240 522 aa22.63■■□□□ 1.21
COL20A1-207ENST00000494913 FMR1Q06787 632 aaKnown RBP eCLIP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms