RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
COL4A2-209ENST00000494852 ZNF428Q96B54 188 aa20.68■□□□□ 0.9
COL4A2-209ENST00000494852 RNF186Q9NXI6 227 aa20.68■□□□□ 0.9
COL4A2-209ENST00000494852 PCDH10Q9P2E7 1040 aa20.68■□□□□ 0.9
COL4A2-209ENST00000494852 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
COL4A2-209ENST00000494852 POLR2AP24928 1970 aaKnown RBP20.68■□□□□ 0.9
COL4A2-209ENST00000494852 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
COL4A2-209ENST00000494852 KIF4BQ2VIQ3 1234 aa20.67■□□□□ 0.9
COL4A2-209ENST00000494852 SULF1Q8IWU6 871 aa20.67■□□□□ 0.9
COL4A2-209ENST00000494852 PODXL2Q9NZ53 605 aa20.67■□□□□ 0.9
COL4A2-209ENST00000494852 IRS4O14654 1257 aaPredicted RBP20.66■□□□□ 0.9
COL4A2-209ENST00000494852 SLC10A3P09131 477 aa20.66■□□□□ 0.9
COL4A2-209ENST00000494852 RALBP1Q15311 655 aa20.66■□□□□ 0.9
COL4A2-209ENST00000494852 REM2Q8IYK8 340 aaPredicted RBP20.66■□□□□ 0.9
COL4A2-209ENST00000494852 ZC3H12CQ9C0D7 883 aaKnown RBP20.66■□□□□ 0.9
COL4A2-209ENST00000494852 HYPKQ9NX55 129 aa20.66■□□□□ 0.9
COL4A2-209ENST00000494852 COL4A1P02462 1669 aa20.66■□□□□ 0.9
COL4A2-209ENST00000494852 TRPA1O75762 1119 aa20.65■□□□□ 0.9
COL4A2-209ENST00000494852 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
COL4A2-209ENST00000494852 ZNF609O15014 1411 aa20.64■□□□□ 0.89
COL4A2-209ENST00000494852 NEUROD2Q15784 382 aa20.64■□□□□ 0.89
COL4A2-209ENST00000494852 CSRNP1Q96S65 589 aa20.64■□□□□ 0.89
COL4A2-209ENST00000494852 GGA3Q9NZ52 723 aa20.64■□□□□ 0.89
COL4A2-209ENST00000494852 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.89
COL4A2-209ENST00000494852 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
COL4A2-209ENST00000494852 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
COL4A2-209ENST00000494852 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
COL4A2-209ENST00000494852 RTL5Q5HYW3 569 aaPredicted RBP20.63■□□□□ 0.89
COL4A2-209ENST00000494852 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
COL4A2-209ENST00000494852 CDCA5Q96FF9 252 aa20.63■□□□□ 0.89
COL4A2-209ENST00000494852 AGBL3Q8NEM8 1001 aa20.62■□□□□ 0.89
COL4A2-209ENST00000494852 AKAP11Q9UKA4 1901 aa20.62■□□□□ 0.89
COL4A2-209ENST00000494852 SCN9AQ15858 1988 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 G3V3G9 751 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 FKBP1BP68106 108 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 DCAF8Q5TAQ9 597 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
COL4A2-209ENST00000494852 CCDC146Q8IYE0 955 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 RUNDC1Q96C34 613 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 GGA1Q9UJY5 639 aa20.61■□□□□ 0.89
COL4A2-209ENST00000494852 ASTN2O75129 1339 aaPredicted RBP20.6■□□□□ 0.89
COL4A2-209ENST00000494852 UFL1O94874 794 aa20.6■□□□□ 0.89
COL4A2-209ENST00000494852 SCARF1Q14162 830 aa20.6■□□□□ 0.89
COL4A2-209ENST00000494852 CTU1Q7Z7A3 348 aaKnown RBP20.6■□□□□ 0.89
COL4A2-209ENST00000494852 SEC31BQ9NQW1 1179 aa20.6■□□□□ 0.89
COL4A2-209ENST00000494852 PDE4DIPQ5VU43 2346 aa20.59■□□□□ 0.89
COL4A2-209ENST00000494852 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
COL4A2-209ENST00000494852 ANGEL2Q5VTE6 544 aaKnown RBP20.59■□□□□ 0.89
COL4A2-209ENST00000494852 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
COL4A2-209ENST00000494852 RASAL3Q86YV0 1011 aa20.59■□□□□ 0.89
COL4A2-209ENST00000494852 PITPNM2Q9BZ72 1349 aa20.58■□□□□ 0.89
COL4A2-209ENST00000494852 SOX10P56693 466 aa20.58■□□□□ 0.89
COL4A2-209ENST00000494852 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
COL4A2-209ENST00000494852 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.89
COL4A2-209ENST00000494852 GMLQ99445 158 aa20.58■□□□□ 0.89
COL4A2-209ENST00000494852 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
COL4A2-209ENST00000494852 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
COL4A2-209ENST00000494852 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
COL4A2-209ENST00000494852 USP17L8P0C7I0 530 aa20.56■□□□□ 0.88
COL4A2-209ENST00000494852 CCDC191Q8NCU4 936 aa20.56■□□□□ 0.88
COL4A2-209ENST00000494852 PAPPA2Q9BXP8 1791 aa20.56■□□□□ 0.88
COL4A2-209ENST00000494852 XDHP47989 1333 aa20.55■□□□□ 0.88
COL4A2-209ENST00000494852 PSME4Q14997 1843 aa20.55■□□□□ 0.88
COL4A2-209ENST00000494852 PDE8AO60658 829 aa20.55■□□□□ 0.88
COL4A2-209ENST00000494852 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
COL4A2-209ENST00000494852 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
COL4A2-209ENST00000494852 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
COL4A2-209ENST00000494852 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
COL4A2-209ENST00000494852 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
COL4A2-209ENST00000494852 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
COL4A2-209ENST00000494852 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
COL4A2-209ENST00000494852 PHAXQ9H814 394 aaKnown RBP20.54■□□□□ 0.88
COL4A2-209ENST00000494852 ZNF853P0CG23 659 aa20.53■□□□□ 0.88
COL4A2-209ENST00000494852 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
COL4A2-209ENST00000494852 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL4A2-209ENST00000494852 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
COL4A2-209ENST00000494852 MYD88Q99836 296 aa20.53■□□□□ 0.88
COL4A2-209ENST00000494852 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
COL4A2-209ENST00000494852 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
COL4A2-209ENST00000494852 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
COL4A2-209ENST00000494852 TM4SF4P48230 202 aa20.5■□□□□ 0.87
COL4A2-209ENST00000494852 NOM1Q5C9Z4 860 aaKnown RBP20.5■□□□□ 0.87
COL4A2-209ENST00000494852 PRPF38BQ5VTL8 546 aaKnown RBP20.5■□□□□ 0.87
COL4A2-209ENST00000494852 MOB2Q70IA6 237 aa20.5■□□□□ 0.87
COL4A2-209ENST00000494852 ZNF296Q8WUU4 475 aaPredicted RBP20.5■□□□□ 0.87
COL4A2-209ENST00000494852 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
COL4A2-209ENST00000494852 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
COL4A2-209ENST00000494852 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
COL4A2-209ENST00000494852 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
COL4A2-209ENST00000494852 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
COL4A2-209ENST00000494852 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
COL4A2-209ENST00000494852 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
COL4A2-209ENST00000494852 TBC1D8O95759 1140 aa20.48■□□□□ 0.87
COL4A2-209ENST00000494852 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
COL4A2-209ENST00000494852 MMP14P50281 582 aa20.48■□□□□ 0.87
COL4A2-209ENST00000494852 NBPF9Q3BBW0 867 aa20.48■□□□□ 0.87
COL4A2-209ENST00000494852 OGFOD1Q8N543 542 aa20.48■□□□□ 0.87
COL4A2-209ENST00000494852 JARID2Q92833 1246 aaPredicted RBP20.48■□□□□ 0.87
COL4A2-209ENST00000494852 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms