RNA–Protein interactions for RNA: ENST00000494788.1

MAPRE3-209, Transcript of microtubule associated protein RP/EB family member 3, humanhuman

TSL 2

Gene MAPRE3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAPRE3-209ENST00000494788 NEFMP07197 916 aa19.72■□□□□ 0.75
MAPRE3-209ENST00000494788 TBC1D16Q8TBP0 767 aa19.72■□□□□ 0.75
MAPRE3-209ENST00000494788 CCER1Q8TC90 406 aaPredicted RBP19.72■□□□□ 0.75
MAPRE3-209ENST00000494788 ZNF296Q8WUU4 475 aaPredicted RBP19.72■□□□□ 0.75
MAPRE3-209ENST00000494788 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
MAPRE3-209ENST00000494788 AIMP1Q12904 312 aaKnown RBP19.71■□□□□ 0.75
MAPRE3-209ENST00000494788 NOM1Q5C9Z4 860 aaKnown RBP19.71■□□□□ 0.75
MAPRE3-209ENST00000494788 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
MAPRE3-209ENST00000494788 COL4A1P02462 1669 aa19.71■□□□□ 0.75
MAPRE3-209ENST00000494788 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
MAPRE3-209ENST00000494788 SCARF1Q14162 830 aa19.7■□□□□ 0.74
MAPRE3-209ENST00000494788 EYA3Q99504 573 aa19.7■□□□□ 0.74
MAPRE3-209ENST00000494788 HTTP42858 3142 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 TM4SF4P48230 202 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 FAM89AQ96GI7 184 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 GMLQ99445 158 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 ISCA1Q9BUE6 129 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 HDAC9Q9UKV0 1011 aa19.69■□□□□ 0.74
MAPRE3-209ENST00000494788 ZNF609O15014 1411 aa19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 RPS8P62241 208 aaKnown RBP19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 MOB2Q70IA6 237 aa19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 ZC3H12CQ9C0D7 883 aaKnown RBP19.68■□□□□ 0.74
MAPRE3-209ENST00000494788 FBXO46Q6PJ61 603 aaPredicted RBP19.67■□□□□ 0.74
MAPRE3-209ENST00000494788 AGBL3Q8NEM8 1001 aa19.67■□□□□ 0.74
MAPRE3-209ENST00000494788 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
MAPRE3-209ENST00000494788 PAPPA2Q9BXP8 1791 aa19.66■□□□□ 0.74
MAPRE3-209ENST00000494788 GPR25O00155 361 aa19.66■□□□□ 0.74
MAPRE3-209ENST00000494788 RSBN1LQ6PCB5 846 aaPredicted RBP19.66■□□□□ 0.74
MAPRE3-209ENST00000494788 GCC1Q96CN9 775 aa19.66■□□□□ 0.74
MAPRE3-209ENST00000494788 PITPNM2Q9BZ72 1349 aa19.66■□□□□ 0.74
MAPRE3-209ENST00000494788 UBE2Q2LH0YL09 131 aa19.65■□□□□ 0.74
MAPRE3-209ENST00000494788 PLBD2Q8NHP8 589 aa19.65■□□□□ 0.74
MAPRE3-209ENST00000494788 CFHR5Q9BXR6 569 aa19.65■□□□□ 0.74
MAPRE3-209ENST00000494788 CENPFP49454 3210 aa19.64■□□□□ 0.74
MAPRE3-209ENST00000494788 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
MAPRE3-209ENST00000494788 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
MAPRE3-209ENST00000494788 USP17L8P0C7I0 530 aa19.63■□□□□ 0.73
MAPRE3-209ENST00000494788 HABP4Q5JVS0 413 aaKnown RBP19.63■□□□□ 0.73
MAPRE3-209ENST00000494788 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
MAPRE3-209ENST00000494788 R3HDMLQ9H3Y0 253 aa19.63■□□□□ 0.73
MAPRE3-209ENST00000494788 MYOZ2Q9NPC6 264 aa19.63■□□□□ 0.73
MAPRE3-209ENST00000494788 KIAA0100Q14667 2235 aaKnown RBP19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 ATP5J2-PTCD1G3V325 749 aa19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 RIPK4P57078 832 aa19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 PRAMEF18Q5VWM3 479 aa19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 SCAF8Q9UPN6 1271 aaKnown RBP19.62■□□□□ 0.73
MAPRE3-209ENST00000494788 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
MAPRE3-209ENST00000494788 SEC31BQ9NQW1 1179 aa19.61■□□□□ 0.73
MAPRE3-209ENST00000494788 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
MAPRE3-209ENST00000494788 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 CHL1O00533 1208 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 FKTNO75072 461 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 UFL1O94874 794 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 GGA1Q9UJY5 639 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 PSME4Q14997 1843 aa19.6■□□□□ 0.73
MAPRE3-209ENST00000494788 NBPF9Q3BBW0 867 aa19.59■□□□□ 0.73
MAPRE3-209ENST00000494788 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
MAPRE3-209ENST00000494788 G3V3G9 751 aa19.58■□□□□ 0.72
MAPRE3-209ENST00000494788 DCAF8Q5TAQ9 597 aa19.58■□□□□ 0.72
MAPRE3-209ENST00000494788 PODNQ7Z5L7 613 aa19.58■□□□□ 0.72
MAPRE3-209ENST00000494788 USP17L3A6NCW0 530 aa19.57■□□□□ 0.72
MAPRE3-209ENST00000494788 USP17L4A6NCW7 530 aa19.57■□□□□ 0.72
MAPRE3-209ENST00000494788 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
MAPRE3-209ENST00000494788 USP17L1Q7RTZ2 530 aa19.57■□□□□ 0.72
MAPRE3-209ENST00000494788 BRCA2P51587 3418 aa19.57■□□□□ 0.72
MAPRE3-209ENST00000494788 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
MAPRE3-209ENST00000494788 SREBF2Q12772 1141 aa19.56■□□□□ 0.72
MAPRE3-209ENST00000494788 LDLRAD1Q5T700 205 aa19.56■□□□□ 0.72
MAPRE3-209ENST00000494788 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
MAPRE3-209ENST00000494788 DBF4Q9UBU7 674 aaPredicted RBP19.56■□□□□ 0.72
MAPRE3-209ENST00000494788 POTEFA5A3E0 1075 aa19.55■□□□□ 0.72
MAPRE3-209ENST00000494788 WTIPA6NIX2 430 aaPredicted RBP19.54■□□□□ 0.72
MAPRE3-209ENST00000494788 WNT10BO00744 389 aa19.54■□□□□ 0.72
MAPRE3-209ENST00000494788 MKRN3Q13064 507 aaKnown RBP19.54■□□□□ 0.72
MAPRE3-209ENST00000494788 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
MAPRE3-209ENST00000494788 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
MAPRE3-209ENST00000494788 HOXB7P09629 217 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 TTLL12Q14166 644 aaPredicted RBP19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 SPRYD7Q5W111 196 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 HYPKQ9NX55 129 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 CEP290O15078 2479 aa19.53■□□□□ 0.72
MAPRE3-209ENST00000494788 XDHP47989 1333 aa19.52■□□□□ 0.72
MAPRE3-209ENST00000494788 ALDH1A1P00352 501 aa19.52■□□□□ 0.72
MAPRE3-209ENST00000494788 ATP2B4P23634 1241 aa19.52■□□□□ 0.72
MAPRE3-209ENST00000494788 NF2P35240 595 aa19.51■□□□□ 0.71
MAPRE3-209ENST00000494788 FXR1P51114 621 aaKnown RBP eCLIP19.51■□□□□ 0.71
MAPRE3-209ENST00000494788 OTOP1Q7RTM1 612 aa19.51■□□□□ 0.71
MAPRE3-209ENST00000494788 MXD3Q9BW11 206 aa19.51■□□□□ 0.71
MAPRE3-209ENST00000494788 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
MAPRE3-209ENST00000494788 INHBEP58166 350 aa19.5■□□□□ 0.71
MAPRE3-209ENST00000494788 CCDC152Q4G0S7 254 aa19.5■□□□□ 0.71
MAPRE3-209ENST00000494788 TRIM17Q9Y577 477 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms