RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZC3H12CQ9C0D7 883 aaKnown RBP12.28□□□□□ -0.44
MSH5-218ENST00000494646 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
MSH5-218ENST00000494646 CNOT7Q9UIV1 285 aaKnown RBP12.28□□□□□ -0.44
MSH5-218ENST00000494646 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
MSH5-218ENST00000494646 SPEF2Q9C093 1822 aa12.27□□□□□ -0.44
MSH5-218ENST00000494646 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.44
MSH5-218ENST00000494646 G3V3G9 751 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 H7C1W4 665 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 PSMD14O00487 310 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 UBE3BQ7Z3V4 1068 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 EYA3Q99504 573 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 CDHR2Q9BYE9 1310 aa12.27□□□□□ -0.45
MSH5-218ENST00000494646 WTIPA6NIX2 430 aaPredicted RBP12.26□□□□□ -0.45
MSH5-218ENST00000494646 F6X3S4 739 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 TRAF5O00463 557 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 ECE2O60344 883 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 UFL1O94874 794 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 HSPA1AP0DMV8 641 aaKnown RBP12.26□□□□□ -0.45
MSH5-218ENST00000494646 HSPA1BP0DMV9 641 aaKnown RBP12.26□□□□□ -0.45
MSH5-218ENST00000494646 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
MSH5-218ENST00000494646 CTSWP56202 376 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 DEFB115Q30KQ5 88 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
MSH5-218ENST00000494646 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 GREM2Q9H772 168 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 GGA1Q9UJY5 639 aa12.26□□□□□ -0.45
MSH5-218ENST00000494646 TRPM7Q96QT4 1865 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 H7C1D1 291 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 VEGFBP49765 207 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 GCKRQ14397 625 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
MSH5-218ENST00000494646 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 MYH16Q9H6N6 1097 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 ABT1Q9ULW3 272 aaKnown RBP12.25□□□□□ -0.45
MSH5-218ENST00000494646 SCN9AQ15858 1988 aa12.25□□□□□ -0.45
MSH5-218ENST00000494646 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
MSH5-218ENST00000494646 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
MSH5-218ENST00000494646 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
MSH5-218ENST00000494646 GLIS2Q9BZE0 524 aaPredicted RBP12.24□□□□□ -0.45
MSH5-218ENST00000494646 MINPP1Q9UNW1 487 aa12.24□□□□□ -0.45
MSH5-218ENST00000494646 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 XDHP47989 1333 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 CASP7P55210 303 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 CST9Q5W186 159 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 DLK2Q6UY11 383 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
MSH5-218ENST00000494646 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 EGFRP00533 1210 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 ITGA6P23229 1130 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 ATP2B4P23634 1241 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 GRM1Q13255 1194 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 DPF2Q92785 391 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
MSH5-218ENST00000494646 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
MSH5-218ENST00000494646 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
MSH5-218ENST00000494646 CSF1RP07333 972 aa12.21□□□□□ -0.45
MSH5-218ENST00000494646 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
MSH5-218ENST00000494646 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.45
MSH5-218ENST00000494646 BEND3Q5T5X7 828 aa12.21□□□□□ -0.45
MSH5-218ENST00000494646 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
MSH5-218ENST00000494646 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
MSH5-218ENST00000494646 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.45
MSH5-218ENST00000494646 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
MSH5-218ENST00000494646 WDR33Q9C0J8 1336 aaKnown RBP12.2□□□□□ -0.46
MSH5-218ENST00000494646 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
MSH5-218ENST00000494646 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 ZC3H15Q8WU90 426 aaKnown RBP12.2□□□□□ -0.46
MSH5-218ENST00000494646 MPHOSPH8Q99549 860 aa12.2□□□□□ -0.46
MSH5-218ENST00000494646 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
MSH5-218ENST00000494646 FOXO4P98177 505 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 EPHA10Q5JZY3 1008 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
MSH5-218ENST00000494646 FBXW7Q969H0 707 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
MSH5-218ENST00000494646 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
MSH5-218ENST00000494646 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 SNAP23O00161 211 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 FOXN1O15353 648 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 TAF5LO75529 589 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
MSH5-218ENST00000494646 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
MSH5-218ENST00000494646 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms