RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-209ENST00000494623 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHMP3-209ENST00000494623 TTC6Q86TZ1 520 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 BRF1Q92994 677 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
CHMP3-209ENST00000494623 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
CHMP3-209ENST00000494623 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
CHMP3-209ENST00000494623 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
CHMP3-209ENST00000494623 PIGBQ92521 554 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 GTF3C6Q969F1 213 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 CIAO1O76071 339 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 CCDC39Q9UFE4 941 aa13.28□□□□□ -0.28
CHMP3-209ENST00000494623 PARP4Q9UKK3 1724 aaKnown RBP13.28□□□□□ -0.28
CHMP3-209ENST00000494623 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.28
CHMP3-209ENST00000494623 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.28
CHMP3-209ENST00000494623 ZMYM1Q5SVZ6 1142 aa13.27□□□□□ -0.28
CHMP3-209ENST00000494623 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.28
CHMP3-209ENST00000494623 MPNDQ8N594 471 aa13.27□□□□□ -0.28
CHMP3-209ENST00000494623 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
CHMP3-209ENST00000494623 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
CHMP3-209ENST00000494623 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
CHMP3-209ENST00000494623 ADORA1P30542 326 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 DHX32Q7L7V1 743 aaKnown RBP13.26□□□□□ -0.29
CHMP3-209ENST00000494623 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-209ENST00000494623 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
CHMP3-209ENST00000494623 GOLGA6L4A6NEF3 574 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 GPTP24298 496 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 SCRN1Q12765 414 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 ZKSCAN5Q9Y2L8 839 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 H3BQV1 296 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 M0R2C6 588 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 STARD3NLO95772 234 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
CHMP3-209ENST00000494623 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 CAMK4Q16566 473 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
CHMP3-209ENST00000494623 MAST3O60307 1309 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 LIG1P18858 919 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 FOSBP53539 338 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
CHMP3-209ENST00000494623 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-209ENST00000494623 E7EWF7 191 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-209ENST00000494623 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
CHMP3-209ENST00000494623 HLFQ16534 295 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-209ENST00000494623 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
CHMP3-209ENST00000494623 PPFIA3O75145 1194 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 ADCY5O95622 1261 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 TRIM28Q13263 835 aaKnown RBP13.24□□□□□ -0.29
CHMP3-209ENST00000494623 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-209ENST00000494623 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 UBR2Q8IWV8 1755 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 OFD1O75665 1012 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-209ENST00000494623 NUP188Q5SRE5 1749 aa13.24□□□□□ -0.29
CHMP3-209ENST00000494623 ELP1O95163 1332 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 PFKFB2O60825 505 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 EXOSC10Q01780 885 aaKnown RBP13.23□□□□□ -0.29
CHMP3-209ENST00000494623 SCARF1Q14162 830 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-209ENST00000494623 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-209ENST00000494623 ZAP70P43403 619 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
CHMP3-209ENST00000494623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHMP3-209ENST00000494623 TJP1Q07157 1748 aa13.22□□□□□ -0.29
CHMP3-209ENST00000494623 KDM4AO75164 1064 aa13.22□□□□□ -0.29
CHMP3-209ENST00000494623 CSF1RP07333 972 aa13.22□□□□□ -0.29
CHMP3-209ENST00000494623 HAND2P61296 217 aa13.22□□□□□ -0.29
CHMP3-209ENST00000494623 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
CHMP3-209ENST00000494623 RESTQ13127 1097 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms