RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NEURL1BA8MQ27 555 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 RASSF7Q02833 373 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 CWC25Q9NXE8 425 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-217ENST00000494395 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 CDHR2Q9BYE9 1310 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 F6X3S4 739 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 C21orf2O43822 256 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
ITGB1-217ENST00000494395 ALDH1B1P30837 517 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
ITGB1-217ENST00000494395 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
ITGB1-217ENST00000494395 ALDH1L2Q3SY69 923 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
ITGB1-217ENST00000494395 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 ABCC4O15439 1325 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 IRS4O14654 1257 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-217ENST00000494395 KIF3CO14782 793 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 CASP7P55210 303 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-217ENST00000494395 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-217ENST00000494395 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
ITGB1-217ENST00000494395 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
ITGB1-217ENST00000494395 H7C1W4 665 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 DPYSL4O14531 572 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
ITGB1-217ENST00000494395 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 GCKRQ14397 625 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
ITGB1-217ENST00000494395 RBM17Q96I25 401 aaKnown RBP11.17□□□□□ -0.62
ITGB1-217ENST00000494395 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
ITGB1-217ENST00000494395 PTPRCP08575 1304 aa11.16□□□□□ -0.62
ITGB1-217ENST00000494395 PDE8AO60658 829 aa11.16□□□□□ -0.62
ITGB1-217ENST00000494395 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
ITGB1-217ENST00000494395 JARID2Q92833 1246 aaPredicted RBP11.16□□□□□ -0.62
ITGB1-217ENST00000494395 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
ITGB1-217ENST00000494395 COL4A5P29400 1685 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
ITGB1-217ENST00000494395 LMNB1P20700 586 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
ITGB1-217ENST00000494395 GRAPQ13588 217 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
ITGB1-217ENST00000494395 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
ITGB1-217ENST00000494395 PLA2G12BQ9BX93 195 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 RNF181Q9P0P0 153 aa11.15□□□□□ -0.62
ITGB1-217ENST00000494395 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
ITGB1-217ENST00000494395 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 BBOX1O75936 387 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 C7P10643 843 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 FKBP4Q02790 459 aaKnown RBP eCLIP11.14□□□□□ -0.63
ITGB1-217ENST00000494395 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 DDX46Q7L014 1031 aaKnown RBP11.14□□□□□ -0.63
ITGB1-217ENST00000494395 UBE3BQ7Z3V4 1068 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
ITGB1-217ENST00000494395 PSMD1Q99460 953 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 RTL9Q8NET4 1388 aa11.14□□□□□ -0.63
ITGB1-217ENST00000494395 HSP90B1P14625 803 aaKnown RBP11.13□□□□□ -0.63
ITGB1-217ENST00000494395 MLLT3P42568 568 aaPredicted RBP11.13□□□□□ -0.63
ITGB1-217ENST00000494395 CTSWP56202 376 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 RTKN2Q8IZC4 609 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 TTLL11Q8NHH1 800 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
ITGB1-217ENST00000494395 UTYO14607 1347 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 CSF1RP07333 972 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 CCDC152Q4G0S7 254 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 TMC4Q7Z404 712 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 SP8Q8IXZ3 490 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 RTFDC1Q9BY42 306 aaPredicted RBP11.12□□□□□ -0.63
ITGB1-217ENST00000494395 SRCIN1Q9C0H9 1055 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
ITGB1-217ENST00000494395 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
ITGB1-217ENST00000494395 GRM8O00222 908 aa11.11□□□□□ -0.63
ITGB1-217ENST00000494395 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
ITGB1-217ENST00000494395 FOXO4P98177 505 aa11.11□□□□□ -0.63
ITGB1-217ENST00000494395 SLC4A10Q6U841 1118 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms