RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 ZC3H12CQ9C0D7 883 aaKnown RBP27.69■■■□□ 2.02
HPS3-207ENST00000494327 DBNDD1Q9H9R9 158 aa27.69■■■□□ 2.02
HPS3-207ENST00000494327 NOB1Q9ULX3 412 aaKnown RBP27.69■■■□□ 2.02
HPS3-207ENST00000494327 ANKRD18BA2A2Z9 1011 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 POTEIP0CG38 1075 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 POTEJP0CG39 1038 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 DOK7Q18PE1 504 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 EAPPQ56P03 285 aaPredicted RBP27.68■■■□□ 2.02
HPS3-207ENST00000494327 EPHA10Q5JZY3 1008 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 LMBR1LQ6UX01 489 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 MPHOSPH8Q99549 860 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 MINPP1Q9UNW1 487 aa27.68■■■□□ 2.02
HPS3-207ENST00000494327 XDHP47989 1333 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 G3V3G9 751 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 LMOD1P29536 600 aaPredicted RBP27.67■■■□□ 2.02
HPS3-207ENST00000494327 EPHX2P34913 555 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 RARSP54136 660 aaKnown RBP27.67■■■□□ 2.02
HPS3-207ENST00000494327 DCAF8Q5TAQ9 597 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 CIAPIN1Q6FI81 312 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 MYH3P11055 1940 aa27.67■■■□□ 2.02
HPS3-207ENST00000494327 YDJCA8MPS7 323 aa27.66■■■□□ 2.02
HPS3-207ENST00000494327 NBPF7P0C2Y1 421 aaPredicted RBP27.66■■■□□ 2.02
HPS3-207ENST00000494327 IFIT5Q13325 482 aaKnown RBP27.66■■■□□ 2.02
HPS3-207ENST00000494327 SUCLG2Q96I99 432 aa27.66■■■□□ 2.02
HPS3-207ENST00000494327 ATP2B4P23634 1241 aa27.65■■■□□ 2.02
HPS3-207ENST00000494327 CLEC11AQ9Y240 323 aa27.65■■■□□ 2.02
HPS3-207ENST00000494327 ECE2O60344 883 aa27.64■■■□□ 2.02
HPS3-207ENST00000494327 EPS15P42566 896 aa27.64■■■□□ 2.02
HPS3-207ENST00000494327 SCNN1DP51172 638 aa27.64■■■□□ 2.02
HPS3-207ENST00000494327 TNIP1Q15025 636 aa27.64■■■□□ 2.02
HPS3-207ENST00000494327 CHADLQ6NUI6 762 aa27.64■■■□□ 2.02
HPS3-207ENST00000494327 WTIPA6NIX2 430 aaPredicted RBP27.63■■■□□ 2.01
HPS3-207ENST00000494327 CCDC57Q2TAC2 916 aa27.63■■■□□ 2.01
HPS3-207ENST00000494327 APLP1P51693 650 aa27.62■■■□□ 2.01
HPS3-207ENST00000494327 TAF7LQ5H9L4 462 aa27.62■■■□□ 2.01
HPS3-207ENST00000494327 GMPSP49915 693 aaPredicted RBP27.61■■■□□ 2.01
HPS3-207ENST00000494327 CCT4P50991 539 aaKnown RBP27.61■■■□□ 2.01
HPS3-207ENST00000494327 BRPF1P55201 1214 aaPredicted RBP27.61■■■□□ 2.01
HPS3-207ENST00000494327 PNMA8AQ86V59 439 aaPredicted RBP27.61■■■□□ 2.01
HPS3-207ENST00000494327 LDHDQ86WU2 507 aa27.61■■■□□ 2.01
HPS3-207ENST00000494327 API5Q9BZZ5 524 aaKnown RBP27.61■■■□□ 2.01
HPS3-207ENST00000494327 KCNQ5Q9NR82 932 aa27.61■■■□□ 2.01
HPS3-207ENST00000494327 SCN4AP35499 1836 aa27.61■■■□□ 2.01
HPS3-207ENST00000494327 UTYO14607 1347 aa27.61■■■□□ 2.01
HPS3-207ENST00000494327 LTBP1Q14766 1721 aa27.61■■■□□ 2.01
HPS3-207ENST00000494327 KAZALD1Q96I82 304 aa27.6■■■□□ 2.01
HPS3-207ENST00000494327 ZNF594Q96JF6 807 aaPredicted RBP27.6■■■□□ 2.01
HPS3-207ENST00000494327 ANKRD2Q9GZV1 360 aa27.6■■■□□ 2.01
HPS3-207ENST00000494327 PSMD14O00487 310 aa27.59■■■□□ 2.01
HPS3-207ENST00000494327 USP44Q9H0E7 712 aa27.59■■■□□ 2.01
HPS3-207ENST00000494327 SPEF2Q9C093 1822 aa27.59■■■□□ 2.01
HPS3-207ENST00000494327 CHRNDQ07001 517 aa27.58■■■□□ 2.01
HPS3-207ENST00000494327 BICC1Q9H694 974 aaKnown RBP27.58■■■□□ 2.01
HPS3-207ENST00000494327 GPRC5DQ9NZD1 345 aa27.58■■■□□ 2.01
HPS3-207ENST00000494327 ZBTB12Q9Y330 459 aaPredicted RBP27.58■■■□□ 2.01
HPS3-207ENST00000494327 BCAR3O75815 825 aa27.57■■■□□ 2
HPS3-207ENST00000494327 HTRA3P83110 453 aa27.57■■■□□ 2
HPS3-207ENST00000494327 HELBQ8NG08 1087 aaPredicted RBP27.57■■■□□ 2
HPS3-207ENST00000494327 LEMD3Q9Y2U8 911 aa27.57■■■□□ 2
HPS3-207ENST00000494327 ZBED9Q6R2W3 1325 aa27.57■■■□□ 2
HPS3-207ENST00000494327 KIF16BQ96L93 1317 aa27.57■■■□□ 2
HPS3-207ENST00000494327 KCNJ4P48050 445 aa27.56■■■□□ 2
HPS3-207ENST00000494327 LDHAL6AQ6ZMR3 332 aa27.56■■■□□ 2
HPS3-207ENST00000494327 FRAT1Q92837 279 aaPredicted RBP27.56■■■□□ 2
HPS3-207ENST00000494327 TAF5LO75529 589 aa27.55■■■□□ 2
HPS3-207ENST00000494327 CNNM1Q9NRU3 951 aa27.55■■■□□ 2
HPS3-207ENST00000494327 ADARB2Q9NS39 739 aaKnown RBP27.55■■■□□ 2
HPS3-207ENST00000494327 ZNF804BA4D1E1 1349 aa27.55■■■□□ 2
HPS3-207ENST00000494327 PLIN1O60240 522 aa27.54■■■□□ 2
HPS3-207ENST00000494327 MAP1SQ66K74 1059 aaPredicted RBP27.54■■■□□ 2
HPS3-207ENST00000494327 USP50Q70EL3 339 aaPredicted RBP27.54■■■□□ 2
HPS3-207ENST00000494327 CNOT7Q9UIV1 285 aaKnown RBP27.54■■■□□ 2
HPS3-207ENST00000494327 MED23Q9ULK4 1368 aa27.53■■■□□ 2
HPS3-207ENST00000494327 ANKRD44Q8N8A2 993 aa27.53■■■□□ 2
HPS3-207ENST00000494327 ARHGAP45Q92619 1136 aa27.53■■■□□ 2
HPS3-207ENST00000494327 SHTN1A0MZ66 631 aa27.52■■■□□ 2
HPS3-207ENST00000494327 SNAP23O00161 211 aa27.52■■■□□ 2
HPS3-207ENST00000494327 IPO8O15397 1037 aaKnown RBP27.52■■■□□ 2
HPS3-207ENST00000494327 RABL6Q3YEC7 729 aaPredicted RBP27.52■■■□□ 2
HPS3-207ENST00000494327 TXNRD3Q86VQ6 643 aa27.52■■■□□ 2
HPS3-207ENST00000494327 H7C1D1 291 aa27.51■■□□□ 1.99
HPS3-207ENST00000494327 KLRK1P26718 216 aa27.51■■□□□ 1.99
HPS3-207ENST00000494327 PODNQ7Z5L7 613 aa27.51■■□□□ 1.99
HPS3-207ENST00000494327 MICALL2Q8IY33 904 aa27.51■■□□□ 1.99
HPS3-207ENST00000494327 CNTROBQ8N137 903 aa27.51■■□□□ 1.99
HPS3-207ENST00000494327 VIL1P09327 827 aaKnown RBP27.5■■□□□ 1.99
HPS3-207ENST00000494327 UBTFL1P0CB47 393 aaPredicted RBP27.5■■□□□ 1.99
HPS3-207ENST00000494327 DPF2Q92785 391 aa27.5■■□□□ 1.99
HPS3-207ENST00000494327 PUS3Q9BZE2 481 aaKnown RBP27.5■■□□□ 1.99
HPS3-207ENST00000494327 FBXW7Q969H0 707 aa27.49■■□□□ 1.99
HPS3-207ENST00000494327 ITGBL1O95965 494 aaPredicted RBP27.48■■□□□ 1.99
HPS3-207ENST00000494327 RPS12P25398 132 aaKnown RBP27.48■■□□□ 1.99
HPS3-207ENST00000494327 COA1Q9GZY4 146 aa27.48■■□□□ 1.99
HPS3-207ENST00000494327 TNNQ9UQP3 1299 aa27.48■■□□□ 1.99
HPS3-207ENST00000494327 USP17L3A6NCW0 530 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 USP17L4A6NCW7 530 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 TRIM27P14373 513 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 RBM26Q5T8P6 1007 aaKnown RBP27.47■■□□□ 1.99
HPS3-207ENST00000494327 ATF7IPQ6VMQ6 1270 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 USP17L1Q7RTZ2 530 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms