RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 CYP27B1O15528 508 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 GCKRQ14397 625 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 RABL6Q3YEC7 729 aaPredicted RBP13.6□□□□□ -0.23
RFC4-214ENST00000494047 LARP1BQ659C4 914 aaKnown RBP13.6□□□□□ -0.23
RFC4-214ENST00000494047 NOL8Q76FK4 1167 aaKnown RBP13.6□□□□□ -0.23
RFC4-214ENST00000494047 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 FMNL2Q96PY5 1086 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
RFC4-214ENST00000494047 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 SH3TC1Q8TE82 1336 aa13.6□□□□□ -0.23
RFC4-214ENST00000494047 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 SLC27A2O14975 620 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 CTAGE5O15320 804 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
RFC4-214ENST00000494047 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.59□□□□□ -0.23
RFC4-214ENST00000494047 CCDC83Q8IWF9 413 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 FAM200AQ8TCP9 573 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 STK32BQ9NY57 414 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 LRP5O75197 1615 aa13.59□□□□□ -0.23
RFC4-214ENST00000494047 KDM4AO75164 1064 aa13.58□□□□□ -0.23
RFC4-214ENST00000494047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.58□□□□□ -0.23
RFC4-214ENST00000494047 SUCLG2Q96I99 432 aa13.58□□□□□ -0.23
RFC4-214ENST00000494047 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.23
RFC4-214ENST00000494047 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.23
RFC4-214ENST00000494047 FIBPO43427 364 aa13.58□□□□□ -0.24
RFC4-214ENST00000494047 SASH1O94885 1247 aa13.58□□□□□ -0.24
RFC4-214ENST00000494047 PHKG2P15735 406 aa13.58□□□□□ -0.24
RFC4-214ENST00000494047 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.24
RFC4-214ENST00000494047 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.24
RFC4-214ENST00000494047 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
RFC4-214ENST00000494047 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.24
RFC4-214ENST00000494047 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
RFC4-214ENST00000494047 IL25Q9H293 177 aa13.58□□□□□ -0.24
RFC4-214ENST00000494047 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
RFC4-214ENST00000494047 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
RFC4-214ENST00000494047 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
RFC4-214ENST00000494047 PLBD2Q8NHP8 589 aa13.57□□□□□ -0.24
RFC4-214ENST00000494047 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
RFC4-214ENST00000494047 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
RFC4-214ENST00000494047 HELLSQ9NRZ9 838 aa13.57□□□□□ -0.24
RFC4-214ENST00000494047 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
RFC4-214ENST00000494047 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
RFC4-214ENST00000494047 UBR2Q8IWV8 1755 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 ITGB4P16144 1822 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 LY75O60449 1722 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
RFC4-214ENST00000494047 PTH1RQ03431 593 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 PDIA6Q15084 440 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 ME3Q16798 604 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
RFC4-214ENST00000494047 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 NAA16Q6N069 864 aaPredicted RBP13.56□□□□□ -0.24
RFC4-214ENST00000494047 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 RNF214Q8ND24 703 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 DSCC1Q9BVC3 393 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
RFC4-214ENST00000494047 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 KCNQ3O43525 872 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 NEMFO60524 1076 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 ADCY5O95622 1261 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 MCMDC2Q4G0Z9 681 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 RBM43Q6ZSC3 357 aaKnown RBP13.55□□□□□ -0.24
RFC4-214ENST00000494047 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 HAUS7Q99871 368 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 SPTLC3Q9NUV7 552 aa13.55□□□□□ -0.24
RFC4-214ENST00000494047 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
RFC4-214ENST00000494047 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 TAF5LO75529 589 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 CIAO1O76071 339 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFC4-214ENST00000494047 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
RFC4-214ENST00000494047 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
RFC4-214ENST00000494047 KBTBD3Q8NAB2 608 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
RFC4-214ENST00000494047 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
RFC4-214ENST00000494047 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
RFC4-214ENST00000494047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFC4-214ENST00000494047 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 DHX16O60231 1041 aaKnown RBP13.53□□□□□ -0.24
RFC4-214ENST00000494047 UQCRHP07919 91 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
RFC4-214ENST00000494047 CDC25BP30305 580 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
RFC4-214ENST00000494047 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
RFC4-214ENST00000494047 TPCN1Q9ULQ1 816 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms