RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 EXOC6Q8TAG9 804 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 CHMP4BQ9H444 224 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 SNED1Q8TER0 1413 aa22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 WTIPA6NIX2 430 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 ATP8B2P98198 1209 aa22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 DPP8Q6V1X1 898 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 MPNDQ8N594 471 aa22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 HELBQ8NG08 1087 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
PDLIM7-208ENST00000493815 PRELPP51888 382 aa22.28■■□□□ 1.16
PDLIM7-208ENST00000493815 CC2D2BQ6DHV5 1058 aa22.28■■□□□ 1.16
PDLIM7-208ENST00000493815 CHRNDQ07001 517 aa22.27■■□□□ 1.16
PDLIM7-208ENST00000493815 TAOK3Q9H2K8 898 aa22.27■■□□□ 1.16
PDLIM7-208ENST00000493815 ZNF277Q9NRM2 450 aaPredicted RBP22.27■■□□□ 1.16
PDLIM7-208ENST00000493815 TAF5LO75529 589 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 SIRT2Q8IXJ6 389 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 GPR101Q96P66 508 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 LRRC37AA6NMS7 1700 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 SNAP23O00161 211 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 POLA2Q14181 598 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 POLLQ9UGP5 575 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 RIPOR2Q9Y4F9 1068 aa22.26■■□□□ 1.15
PDLIM7-208ENST00000493815 SSH3Q8TE77 659 aa22.25■■□□□ 1.15
PDLIM7-208ENST00000493815 C6orf229H3BNL8 230 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 EYA2O00167 538 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 COPRSQ9NQ92 184 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 PCDHB15Q9Y5E8 787 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 XDHP47989 1333 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 FER1L6Q2WGJ9 1857 aa22.24■■□□□ 1.15
PDLIM7-208ENST00000493815 UFL1O94874 794 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 ATG9AQ7Z3C6 839 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 PSMD1Q99460 953 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 RPAP2Q8IXW5 612 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 PODXL2Q9NZ53 605 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 GGA1Q9UJY5 639 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 DUOX1Q9NRD9 1551 aa22.23■■□□□ 1.15
PDLIM7-208ENST00000493815 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
PDLIM7-208ENST00000493815 METTL24Q5JXM2 366 aa22.22■■□□□ 1.15
PDLIM7-208ENST00000493815 RTFDC1Q9BY42 306 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-208ENST00000493815 ANKRD2Q9GZV1 360 aa22.21■■□□□ 1.15
PDLIM7-208ENST00000493815 LTBP3Q9NS15 1303 aa22.21■■□□□ 1.15
PDLIM7-208ENST00000493815 RIMBP2O15034 1052 aa22.2■■□□□ 1.15
PDLIM7-208ENST00000493815 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.15
PDLIM7-208ENST00000493815 AOC3Q16853 763 aa22.2■■□□□ 1.15
PDLIM7-208ENST00000493815 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.15
PDLIM7-208ENST00000493815 RNF181Q9P0P0 153 aa22.2■■□□□ 1.15
PDLIM7-208ENST00000493815 MROH5Q6ZUA9 1318 aa22.2■■□□□ 1.14
PDLIM7-208ENST00000493815 LTBP1Q14766 1721 aa22.2■■□□□ 1.14
PDLIM7-208ENST00000493815 CIAO1O76071 339 aa22.2■■□□□ 1.14
PDLIM7-208ENST00000493815 LMNB1P20700 586 aa22.2■■□□□ 1.14
PDLIM7-208ENST00000493815 KLRK1P26718 216 aa22.2■■□□□ 1.14
PDLIM7-208ENST00000493815 ATP2B4P23634 1241 aa22.19■■□□□ 1.14
PDLIM7-208ENST00000493815 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-208ENST00000493815 KCNJ4P48050 445 aa22.19■■□□□ 1.14
PDLIM7-208ENST00000493815 EXOC6BQ9Y2D4 811 aa22.19■■□□□ 1.14
PDLIM7-208ENST00000493815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-208ENST00000493815 PPIP5K2O43314 1243 aa22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 IL15P40933 162 aaPredicted RBP22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 SUPT20HQ8NEM7 779 aa22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 ZNF804BA4D1E1 1349 aa22.18■■□□□ 1.14
PDLIM7-208ENST00000493815 HMMRO75330 724 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 G3BP1Q13283 466 aaKnown RBP eCLIP22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 OS9Q13438 667 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 LARGE2Q8N3Y3 721 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 PDE8BO95263 885 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 FBXO3Q9UK99 471 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 LEMD3Q9Y2U8 911 aa22.17■■□□□ 1.14
PDLIM7-208ENST00000493815 COL4A5P29400 1685 aa22.16■■□□□ 1.14
PDLIM7-208ENST00000493815 TFCP2Q12800 502 aa22.16■■□□□ 1.14
PDLIM7-208ENST00000493815 CEP126Q9P2H0 1117 aa22.16■■□□□ 1.14
PDLIM7-208ENST00000493815 APBB1O00213 710 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 SASH1O94885 1247 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 KIAA2012Q0VF49 1180 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 DOK7Q18PE1 504 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 EYA3Q99504 573 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 ZC3H12CQ9C0D7 883 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 SBF1O95248 1867 aa22.15■■□□□ 1.14
PDLIM7-208ENST00000493815 A0A1B0GUL6 1792 aa22.14■■□□□ 1.14
PDLIM7-208ENST00000493815 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
PDLIM7-208ENST00000493815 CCDC88AQ3V6T2 1871 aa22.13■■□□□ 1.13
PDLIM7-208ENST00000493815 BCL11AQ9H165 835 aa22.13■■□□□ 1.13
PDLIM7-208ENST00000493815 UBE4AQ14139 1066 aa22.12■■□□□ 1.13
PDLIM7-208ENST00000493815 PUM3Q15397 648 aaKnown RBP22.12■■□□□ 1.13
PDLIM7-208ENST00000493815 JDP2Q8WYK2 163 aa22.12■■□□□ 1.13
PDLIM7-208ENST00000493815 IRS2Q9Y4H2 1338 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 AAMPQ13685 434 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 NIM1KQ8IY84 436 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 MED23Q9ULK4 1368 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 FGFR2P21802 821 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 GYG1P46976 350 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 TIMM10P62072 90 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 ATP2B3Q16720 1220 aa22.11■■□□□ 1.13
PDLIM7-208ENST00000493815 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms