RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 A1BGP04217 495 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 PDE6BP35913 854 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 NBPF3Q9H094 633 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 ADGRG1Q9Y653 693 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 C21orf2O43822 256 aa15.74■□□□□ 0.11
UPF3A-210ENST00000493727 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
UPF3A-210ENST00000493727 ERFEQ4G0M1 354 aa15.74■□□□□ 0.11
UPF3A-210ENST00000493727 NBPF26B4DH59 902 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 NPHP1O15259 732 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 KCNQ3O43525 872 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 NUDT18Q6ZVK8 323 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
UPF3A-210ENST00000493727 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
UPF3A-210ENST00000493727 SETDB2Q96T68 719 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 TAOK3Q9H2K8 898 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 PNMA3Q9UL41 463 aa15.73■□□□□ 0.11
UPF3A-210ENST00000493727 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 SMAPO00193 183 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 ST5P78524 1137 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 MCM10Q7L590 875 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 CCDC24Q8N4L8 307 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 SEPT9Q9UHD8 586 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-210ENST00000493727 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 LAMB4A4D0S4 1761 aa15.72■□□□□ 0.11
UPF3A-210ENST00000493727 MAP2K5Q13163 448 aa15.71■□□□□ 0.11
UPF3A-210ENST00000493727 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.11
UPF3A-210ENST00000493727 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.11
UPF3A-210ENST00000493727 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
UPF3A-210ENST00000493727 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
UPF3A-210ENST00000493727 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
UPF3A-210ENST00000493727 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
UPF3A-210ENST00000493727 DDNO94850 711 aaPredicted RBP15.7■□□□□ 0.1
UPF3A-210ENST00000493727 SRGNP10124 158 aa15.7■□□□□ 0.1
UPF3A-210ENST00000493727 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
UPF3A-210ENST00000493727 STYK1Q6J9G0 422 aa15.7■□□□□ 0.1
UPF3A-210ENST00000493727 PRPF40BQ6NWY9 871 aaKnown RBP15.7■□□□□ 0.1
UPF3A-210ENST00000493727 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
UPF3A-210ENST00000493727 CNTNAP1P78357 1384 aa15.7■□□□□ 0.1
UPF3A-210ENST00000493727 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
UPF3A-210ENST00000493727 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
UPF3A-210ENST00000493727 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
UPF3A-210ENST00000493727 IRF6O14896 467 aa15.68■□□□□ 0.1
UPF3A-210ENST00000493727 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
UPF3A-210ENST00000493727 SOGA3Q5TF21 947 aa15.68■□□□□ 0.1
UPF3A-210ENST00000493727 C7orf43Q8WVR3 580 aa15.68■□□□□ 0.1
UPF3A-210ENST00000493727 THUMPD2Q9BTF0 503 aaKnown RBP15.68■□□□□ 0.1
UPF3A-210ENST00000493727 MASTLQ96GX5 879 aa15.67■□□□□ 0.1
UPF3A-210ENST00000493727 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
UPF3A-210ENST00000493727 LDHDQ86WU2 507 aa15.66■□□□□ 0.1
UPF3A-210ENST00000493727 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
UPF3A-210ENST00000493727 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
UPF3A-210ENST00000493727 LAS1LQ9Y4W2 734 aaKnown RBP15.66■□□□□ 0.1
UPF3A-210ENST00000493727 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
UPF3A-210ENST00000493727 IQCA1LA6NCM1 817 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 FOXN1O15353 648 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
UPF3A-210ENST00000493727 TPTE2Q6XPS3 522 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 PXYLP1Q8TE99 480 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
UPF3A-210ENST00000493727 NUP98P52948 1817 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 SNED1Q8TER0 1413 aa15.65■□□□□ 0.1
UPF3A-210ENST00000493727 KLRG2A4D1S0 409 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-210ENST00000493727 E9PSI1 815 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 OATP04181 439 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 CCDC93Q567U6 631 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 PRDM10Q9NQV6 1147 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 IL16Q14005 1332 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 ZNF541Q9H0D2 1346 aa15.64■□□□□ 0.09
UPF3A-210ENST00000493727 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 CENPBP07199 599 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 NBPF10Q6P3W6 841 aaKnown RBP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 METTL3Q86U44 580 aaKnown RBP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 NBPF15Q8N660 670 aa15.63■□□□□ 0.09
UPF3A-210ENST00000493727 ZFRQ96KR1 1074 aaKnown RBP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
UPF3A-210ENST00000493727 NIP7Q9Y221 180 aaKnown RBP eCLIP15.63■□□□□ 0.09
UPF3A-210ENST00000493727 NPR1P16066 1061 aa15.62■□□□□ 0.09
UPF3A-210ENST00000493727 GNAI1P63096 354 aa15.62■□□□□ 0.09
UPF3A-210ENST00000493727 FKBP4Q02790 459 aaKnown RBP eCLIP15.62■□□□□ 0.09
UPF3A-210ENST00000493727 MMRN1Q13201 1228 aa15.62■□□□□ 0.09
UPF3A-210ENST00000493727 CCDC102AQ96A19 550 aa15.62■□□□□ 0.09
UPF3A-210ENST00000493727 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
UPF3A-210ENST00000493727 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
UPF3A-210ENST00000493727 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
UPF3A-210ENST00000493727 VEGFBP49765 207 aa15.61■□□□□ 0.09
UPF3A-210ENST00000493727 KRI1Q8N9T8 703 aaKnown RBP15.61■□□□□ 0.09
UPF3A-210ENST00000493727 MIS18AQ9NYP9 233 aa15.61■□□□□ 0.09
UPF3A-210ENST00000493727 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
UPF3A-210ENST00000493727 TMEM88BA6NKF7 163 aa15.6■□□□□ 0.09
UPF3A-210ENST00000493727 GTF2E1P29083 439 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-210ENST00000493727 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
UPF3A-210ENST00000493727 SLFN5Q08AF3 891 aa15.6■□□□□ 0.09
UPF3A-210ENST00000493727 OLFM4Q6UX06 510 aa15.6■□□□□ 0.09
UPF3A-210ENST00000493727 PHOX2BQ99453 314 aa15.6■□□□□ 0.09
UPF3A-210ENST00000493727 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms