RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
PDCD11-206ENST00000493610 FSTL1Q12841 308 aa17.33■□□□□ 0.36
PDCD11-206ENST00000493610 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.36
PDCD11-206ENST00000493610 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
PDCD11-206ENST00000493610 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
PDCD11-206ENST00000493610 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
PDCD11-206ENST00000493610 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
PDCD11-206ENST00000493610 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
PDCD11-206ENST00000493610 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
PDCD11-206ENST00000493610 PSME4Q14997 1843 aa17.32■□□□□ 0.36
PDCD11-206ENST00000493610 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 EPS15P42566 896 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 TNNQ9UQP3 1299 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 GJA3Q9Y6H8 435 aa17.31■□□□□ 0.36
PDCD11-206ENST00000493610 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 XDHP47989 1333 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 RAD17O75943 681 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 UFL1O94874 794 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
PDCD11-206ENST00000493610 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
PDCD11-206ENST00000493610 EPHX2P34913 555 aa17.29■□□□□ 0.36
PDCD11-206ENST00000493610 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
PDCD11-206ENST00000493610 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
PDCD11-206ENST00000493610 ZNF594Q96JF6 807 aaPredicted RBP17.29■□□□□ 0.36
PDCD11-206ENST00000493610 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
PDCD11-206ENST00000493610 GGA1Q9UJY5 639 aa17.29■□□□□ 0.36
PDCD11-206ENST00000493610 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 SNAP23O00161 211 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 ECE2O60344 883 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 BCAR3O75815 825 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 KLRK1P26718 216 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 HTRA3P83110 453 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 CIAPIN1Q6FI81 312 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
PDCD11-206ENST00000493610 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
PDCD11-206ENST00000493610 PSMD14O00487 310 aa17.27■□□□□ 0.36
PDCD11-206ENST00000493610 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
PDCD11-206ENST00000493610 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
PDCD11-206ENST00000493610 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
PDCD11-206ENST00000493610 DNAJC5GQ8N7S2 189 aa17.27■□□□□ 0.36
PDCD11-206ENST00000493610 ANKRD18BA2A2Z9 1011 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
PDCD11-206ENST00000493610 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
PDCD11-206ENST00000493610 CHRNDQ07001 517 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 EYA3Q99504 573 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
PDCD11-206ENST00000493610 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
PDCD11-206ENST00000493610 PASKQ96RG2 1323 aa17.25■□□□□ 0.35
PDCD11-206ENST00000493610 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
PDCD11-206ENST00000493610 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
PDCD11-206ENST00000493610 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
PDCD11-206ENST00000493610 PUS3Q9BZE2 481 aaKnown RBP17.25■□□□□ 0.35
PDCD11-206ENST00000493610 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
PDCD11-206ENST00000493610 ZNF609O15014 1411 aa17.24■□□□□ 0.35
PDCD11-206ENST00000493610 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
PDCD11-206ENST00000493610 APLP1P51693 650 aa17.24■□□□□ 0.35
PDCD11-206ENST00000493610 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
PDCD11-206ENST00000493610 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
PDCD11-206ENST00000493610 TAF5LO75529 589 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 EGFRP00533 1210 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 TRIM27P14373 513 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
PDCD11-206ENST00000493610 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
PDCD11-206ENST00000493610 INTS3Q68E01 1043 aaKnown RBP17.23■□□□□ 0.35
PDCD11-206ENST00000493610 TRPM4Q8TD43 1214 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 GMLQ99445 158 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
PDCD11-206ENST00000493610 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
PDCD11-206ENST00000493610 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
PDCD11-206ENST00000493610 FMR1Q06787 632 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDCD11-206ENST00000493610 TNIP1Q15025 636 aa17.22■□□□□ 0.35
PDCD11-206ENST00000493610 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
PDCD11-206ENST00000493610 PNMA8AQ86V59 439 aaPredicted RBP17.22■□□□□ 0.35
PDCD11-206ENST00000493610 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
PDCD11-206ENST00000493610 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
PDCD11-206ENST00000493610 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
PDCD11-206ENST00000493610 DPF2Q92785 391 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 MEIS3Q99687 375 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 ANKRD2Q9GZV1 360 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.35
PDCD11-206ENST00000493610 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
PDCD11-206ENST00000493610 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
PDCD11-206ENST00000493610 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
PDCD11-206ENST00000493610 LRRC24Q50LG9 513 aa17.2■□□□□ 0.34
PDCD11-206ENST00000493610 LDHAL6AQ6ZMR3 332 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms