RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 GPC2Q8N158 579 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
SGIP1-213ENST00000493564 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 ZC3H12CQ9C0D7 883 aaKnown RBP11.93□□□□□ -0.5
SGIP1-213ENST00000493564 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
SGIP1-213ENST00000493564 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
SGIP1-213ENST00000493564 IFIT5Q13325 482 aaKnown RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 EAPPQ56P03 285 aaPredicted RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 EYA3Q99504 573 aa11.92□□□□□ -0.5
SGIP1-213ENST00000493564 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
SGIP1-213ENST00000493564 TAF1DQ9H5J8 278 aaPredicted RBP11.92□□□□□ -0.5
SGIP1-213ENST00000493564 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
SGIP1-213ENST00000493564 HACL1Q9UJ83 578 aa11.92□□□□□ -0.5
SGIP1-213ENST00000493564 G3V3G9 751 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 HSPA6P17066 643 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 EPHX2P34913 555 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 EPS15P42566 896 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 CCDC57Q2TAC2 916 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 TAF7LQ5H9L4 462 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 BICC1Q9H694 974 aaKnown RBP11.91□□□□□ -0.5
SGIP1-213ENST00000493564 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 RTL9Q8NET4 1388 aa11.91□□□□□ -0.5
SGIP1-213ENST00000493564 XDHP47989 1333 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 IQCA1LA6NCM1 817 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 SNAP23O00161 211 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 PLIN1O60240 522 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 ECE2O60344 883 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 TAF5LO75529 589 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 SCNN1DP51172 638 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 HTRA3P83110 453 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
SGIP1-213ENST00000493564 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
SGIP1-213ENST00000493564 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SGIP1-213ENST00000493564 UTYO14607 1347 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 SHTN1A0MZ66 631 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 PSMD14O00487 310 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
SGIP1-213ENST00000493564 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
SGIP1-213ENST00000493564 CCT4P50991 539 aaKnown RBP11.89□□□□□ -0.51
SGIP1-213ENST00000493564 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
SGIP1-213ENST00000493564 CHRNDQ07001 517 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 FSTL1Q12841 308 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 TNIP1Q15025 636 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
SGIP1-213ENST00000493564 MYH3P11055 1940 aa11.89□□□□□ -0.51
SGIP1-213ENST00000493564 KLRK1P26718 216 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 LDHAL6AQ6ZMR3 332 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 TXNRD3Q86VQ6 643 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 ANKRD44Q8N8A2 993 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 ANKRD2Q9GZV1 360 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 LRRC37AA6NMS7 1700 aa11.88□□□□□ -0.51
SGIP1-213ENST00000493564 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 KCNJ4P48050 445 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
SGIP1-213ENST00000493564 KLHDC4Q8TBB5 520 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
SGIP1-213ENST00000493564 LEMD3Q9Y2U8 911 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
SGIP1-213ENST00000493564 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
SGIP1-213ENST00000493564 TRIM27P14373 513 aa11.86□□□□□ -0.51
SGIP1-213ENST00000493564 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
SGIP1-213ENST00000493564 RBM26Q5T8P6 1007 aaKnown RBP11.86□□□□□ -0.51
SGIP1-213ENST00000493564 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
SGIP1-213ENST00000493564 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
SGIP1-213ENST00000493564 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
SGIP1-213ENST00000493564 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
SGIP1-213ENST00000493564 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
SGIP1-213ENST00000493564 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
SGIP1-213ENST00000493564 APLP1P51693 650 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 MEIS3Q99687 375 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 MXD3Q9BW11 206 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
SGIP1-213ENST00000493564 LTBP1Q14766 1721 aa11.85□□□□□ -0.51
SGIP1-213ENST00000493564 SCN4AP35499 1836 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 H7C1D1 291 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 VIL1P09327 827 aaKnown RBP11.84□□□□□ -0.51
SGIP1-213ENST00000493564 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
SGIP1-213ENST00000493564 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms