RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 PSMD14O00487 310 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 CHL1O00533 1208 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
TCN2-207ENST00000493542 GRAPQ13588 217 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
TCN2-207ENST00000493542 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
TCN2-207ENST00000493542 DPF2Q92785 391 aa12.09□□□□□ -0.47
TCN2-207ENST00000493542 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
TCN2-207ENST00000493542 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
TCN2-207ENST00000493542 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
TCN2-207ENST00000493542 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
TCN2-207ENST00000493542 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
TCN2-207ENST00000493542 SH3TC1Q8TE82 1336 aa12.08□□□□□ -0.48
TCN2-207ENST00000493542 AKAP11Q9UKA4 1901 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 PSME4Q14997 1843 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
TCN2-207ENST00000493542 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
TCN2-207ENST00000493542 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
TCN2-207ENST00000493542 ZNF428Q96B54 188 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 ISCA1Q9BUE6 129 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
TCN2-207ENST00000493542 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
TCN2-207ENST00000493542 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
TCN2-207ENST00000493542 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
TCN2-207ENST00000493542 SULF1Q8IWU6 871 aa12.06□□□□□ -0.48
TCN2-207ENST00000493542 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
TCN2-207ENST00000493542 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
TCN2-207ENST00000493542 ASTN2O75129 1339 aaPredicted RBP12.06□□□□□ -0.48
TCN2-207ENST00000493542 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
TCN2-207ENST00000493542 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
TCN2-207ENST00000493542 FBXO46Q6PJ61 603 aaPredicted RBP12.05□□□□□ -0.48
TCN2-207ENST00000493542 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
TCN2-207ENST00000493542 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
TCN2-207ENST00000493542 HOXB7P09629 217 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
TCN2-207ENST00000493542 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 FAM89AQ96GI7 184 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
TCN2-207ENST00000493542 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
TCN2-207ENST00000493542 RTL9Q8NET4 1388 aa12.04□□□□□ -0.48
TCN2-207ENST00000493542 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 GPR25O00155 361 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 ECE2O60344 883 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 ZBED9Q6R2W3 1325 aa12.03□□□□□ -0.48
TCN2-207ENST00000493542 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.49
TCN2-207ENST00000493542 GPSM2P81274 684 aa12.02□□□□□ -0.49
TCN2-207ENST00000493542 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
TCN2-207ENST00000493542 ANGEL2Q5VTE6 544 aaKnown RBP12.02□□□□□ -0.49
TCN2-207ENST00000493542 DBF4Q9UBU7 674 aaPredicted RBP12.02□□□□□ -0.49
TCN2-207ENST00000493542 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
TCN2-207ENST00000493542 IL16Q14005 1332 aa12.02□□□□□ -0.49
TCN2-207ENST00000493542 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
TCN2-207ENST00000493542 FKBP1BP68106 108 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
TCN2-207ENST00000493542 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 SCARF1Q14162 830 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 SCAF8Q9UPN6 1271 aaKnown RBP12.01□□□□□ -0.49
TCN2-207ENST00000493542 MYH3P11055 1940 aa12.01□□□□□ -0.49
TCN2-207ENST00000493542 SPEF2Q9C093 1822 aa12□□□□□ -0.49
TCN2-207ENST00000493542 POTEFA5A3E0 1075 aa12□□□□□ -0.49
TCN2-207ENST00000493542 FKTNO75072 461 aa12□□□□□ -0.49
TCN2-207ENST00000493542 VIL1P09327 827 aaKnown RBP12□□□□□ -0.49
TCN2-207ENST00000493542 TM4SF4P48230 202 aa12□□□□□ -0.49
TCN2-207ENST00000493542 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
TCN2-207ENST00000493542 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
TCN2-207ENST00000493542 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
TCN2-207ENST00000493542 TBC1D16Q8TBP0 767 aa12□□□□□ -0.49
TCN2-207ENST00000493542 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
TCN2-207ENST00000493542 MBIPQ9NS73 344 aa12□□□□□ -0.49
TCN2-207ENST00000493542 HYPKQ9NX55 129 aa12□□□□□ -0.49
TCN2-207ENST00000493542 ZNF609O15014 1411 aa12□□□□□ -0.49
TCN2-207ENST00000493542 IRS4O14654 1257 aaPredicted RBP11.99□□□□□ -0.49
TCN2-207ENST00000493542 RPS8P62241 208 aaKnown RBP11.99□□□□□ -0.49
TCN2-207ENST00000493542 PRAMEF18Q5VWM3 479 aa11.99□□□□□ -0.49
TCN2-207ENST00000493542 EYA3Q99504 573 aa11.99□□□□□ -0.49
TCN2-207ENST00000493542 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
TCN2-207ENST00000493542 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
TCN2-207ENST00000493542 PODXL2Q9NZ53 605 aa11.99□□□□□ -0.49
TCN2-207ENST00000493542 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
TCN2-207ENST00000493542 ZNF280AP59817 542 aaPredicted RBP11.98□□□□□ -0.49
TCN2-207ENST00000493542 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
TCN2-207ENST00000493542 ZBTB38Q8NAP3 1195 aaPredicted RBP11.98□□□□□ -0.49
TCN2-207ENST00000493542 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
TCN2-207ENST00000493542 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms