RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
PTCD3-218ENST00000493430 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-218ENST00000493430 DLL1O00548 723 aa6.73□□□□□ -1.33
PTCD3-218ENST00000493430 TNFRSF10BO14763 440 aa6.73□□□□□ -1.33
PTCD3-218ENST00000493430 FOXD4L6Q3SYB3 417 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-218ENST00000493430 FAM26DQ5JW98 314 aa6.73□□□□□ -1.33
PTCD3-218ENST00000493430 FOXD4L3Q6VB84 417 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-218ENST00000493430 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
PTCD3-218ENST00000493430 PBXIP1Q96AQ6 731 aa6.73□□□□□ -1.33
PTCD3-218ENST00000493430 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-218ENST00000493430 STIM2Q9P246 746 aa6.73□□□□□ -1.33
PTCD3-218ENST00000493430 NOS3P29474 1203 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 ZAP70P43403 619 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 CACTIN-AS1Q8N1I8 211 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 OR13H1Q8NG92 308 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 SRA1Q9HD15 236 aaKnown RBP6.72□□□□□ -1.33
PTCD3-218ENST00000493430 SERPINA10Q9UK55 444 aa6.72□□□□□ -1.33
PTCD3-218ENST00000493430 HYAL2Q12891 473 aa6.71□□□□□ -1.34
PTCD3-218ENST00000493430 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-218ENST00000493430 ABTB2Q8N961 1025 aa6.71□□□□□ -1.34
PTCD3-218ENST00000493430 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
PTCD3-218ENST00000493430 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
PTCD3-218ENST00000493430 MUC3BQ9H195 1237 aa6.71□□□□□ -1.34
PTCD3-218ENST00000493430 ARTNQ5T4W7 220 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 TMEM130Q8N3G9 435 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 GPR152Q8TDT2 470 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 AKTIPQ9H8T0 292 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 ZFP64Q9NPA5 681 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
PTCD3-218ENST00000493430 ZBTB39O15060 712 aa6.69□□□□□ -1.34
PTCD3-218ENST00000493430 ATP2B4P23634 1241 aa6.69□□□□□ -1.34
PTCD3-218ENST00000493430 SCNN1AP37088 669 aa6.69□□□□□ -1.34
PTCD3-218ENST00000493430 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
PTCD3-218ENST00000493430 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
PTCD3-218ENST00000493430 SMNDC1O75940 238 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTCD3-218ENST00000493430 COL13A1Q5TAT6 717 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-218ENST00000493430 DZIP1LQ8IYY4 767 aaKnown RBP6.68□□□□□ -1.34
PTCD3-218ENST00000493430 MEGF10Q96KG7 1140 aa6.68□□□□□ -1.34
PTCD3-218ENST00000493430 ABI2Q9NYB9 513 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-218ENST00000493430 F8W735 103 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-218ENST00000493430 CEP135Q66GS9 1140 aa6.67□□□□□ -1.34
PTCD3-218ENST00000493430 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
PTCD3-218ENST00000493430 ALX3O95076 343 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 RPLP1P05386 114 aaKnown RBP6.66□□□□□ -1.34
PTCD3-218ENST00000493430 ATP11AP98196 1134 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 LRP8Q14114 963 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 PDE12Q6L8Q7 609 aaKnown RBP6.66□□□□□ -1.34
PTCD3-218ENST00000493430 PRR23CQ6ZRP0 262 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 NBPF11Q86T75 865 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 LACRTQ9GZZ8 138 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 ELP3Q9H9T3 547 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 SEPT3Q9UH03 358 aa6.66□□□□□ -1.34
PTCD3-218ENST00000493430 LINC01387J3KSC0 135 aa6.65□□□□□ -1.34
PTCD3-218ENST00000493430 KIF4AO95239 1232 aa6.65□□□□□ -1.34
PTCD3-218ENST00000493430 CDC27P30260 824 aa6.65□□□□□ -1.34
PTCD3-218ENST00000493430 NCAPG2Q86XI2 1143 aa6.65□□□□□ -1.34
PTCD3-218ENST00000493430 NUDT16Q96DE0 195 aaKnown RBP6.65□□□□□ -1.34
PTCD3-218ENST00000493430 RASSF4Q9H2L5 321 aa6.65□□□□□ -1.34
PTCD3-218ENST00000493430 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 CYP2E1P05181 493 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-218ENST00000493430 PCSK2P16519 638 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 ZNF438Q7Z4V0 828 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 SLC51AQ86UW1 340 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 PBX4Q9BYU1 374 aa6.64□□□□□ -1.35
PTCD3-218ENST00000493430 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 HYAL3O43820 417 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-218ENST00000493430 CD68P34810 354 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-218ENST00000493430 CEP120Q8N960 986 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 TTC16Q8NEE8 873 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 RNF112Q9ULX5 631 aa6.63□□□□□ -1.35
PTCD3-218ENST00000493430 GLB1P16278 677 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 PTPRAP18433 802 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 CDC25BP30305 580 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 DNM1Q05193 864 aaKnown RBP6.62□□□□□ -1.35
PTCD3-218ENST00000493430 NOM1Q5C9Z4 860 aaKnown RBP6.62□□□□□ -1.35
PTCD3-218ENST00000493430 TXNDC11Q6PKC3 985 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 XKR5Q6UX68 686 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 Q6ZS46 218 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.62□□□□□ -1.35
PTCD3-218ENST00000493430 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
PTCD3-218ENST00000493430 EDEM1Q92611 657 aa6.62□□□□□ -1.35
PTCD3-218ENST00000493430 FSCN2O14926 492 aa6.61□□□□□ -1.35
PTCD3-218ENST00000493430 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
PTCD3-218ENST00000493430 POP1Q99575 1024 aaKnown RBP6.61□□□□□ -1.35
PTCD3-218ENST00000493430 SH2B1Q9NRF2 756 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-218ENST00000493430 CNTN3Q9P232 1028 aa6.61□□□□□ -1.35
PTCD3-218ENST00000493430 FSTP19883 344 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 CES1P23141 567 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 C8orf34Q49A92 452 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 GTF3C2Q8WUA4 911 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-218ENST00000493430 PMEPA1Q969W9 287 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 PSMG3-AS1Q96PY0 264 aa6.6□□□□□ -1.35
PTCD3-218ENST00000493430 CEP41Q9BYV8 373 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms