RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
LSM2-214ENST00000493387 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
LSM2-214ENST00000493387 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
LSM2-214ENST00000493387 C7orf43Q8WVR3 580 aa14.3□□□□□ -0.12
LSM2-214ENST00000493387 SIL1Q9H173 461 aa14.3□□□□□ -0.12
LSM2-214ENST00000493387 CEP126Q9P2H0 1117 aa14.3□□□□□ -0.12
LSM2-214ENST00000493387 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
LSM2-214ENST00000493387 DLEC1Q9Y238 1755 aa14.29□□□□□ -0.12
LSM2-214ENST00000493387 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
LSM2-214ENST00000493387 METTL24Q5JXM2 366 aa14.29□□□□□ -0.12
LSM2-214ENST00000493387 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
LSM2-214ENST00000493387 PUS3Q9BZE2 481 aaKnown RBP14.29□□□□□ -0.12
LSM2-214ENST00000493387 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
LSM2-214ENST00000493387 XDHP47989 1333 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 CHRNDQ07001 517 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 ATG9AQ7Z3C6 839 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 KIAA1551Q9HCM1 1747 aa14.28□□□□□ -0.12
LSM2-214ENST00000493387 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
LSM2-214ENST00000493387 C21orf2O43822 256 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 MPNDQ8N594 471 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 PODXL2Q9NZ53 605 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 LEMD3Q9Y2U8 911 aa14.27□□□□□ -0.13
LSM2-214ENST00000493387 PDE8BO95263 885 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 IGHDP01880 384 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
LSM2-214ENST00000493387 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 SUPT20HQ8NEM7 779 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
LSM2-214ENST00000493387 SLX4Q8IY92 1834 aa14.26□□□□□ -0.13
LSM2-214ENST00000493387 KCNJ4P48050 445 aa14.25□□□□□ -0.13
LSM2-214ENST00000493387 GPSM2P81274 684 aa14.25□□□□□ -0.13
LSM2-214ENST00000493387 UBE4AQ14139 1066 aa14.25□□□□□ -0.13
LSM2-214ENST00000493387 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
LSM2-214ENST00000493387 CENPQQ7L2Z9 268 aaPredicted RBP14.25□□□□□ -0.13
LSM2-214ENST00000493387 LRRCC1Q9C099 1032 aa14.25□□□□□ -0.13
LSM2-214ENST00000493387 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
LSM2-214ENST00000493387 TAF1P21675 1872 aa14.25□□□□□ -0.13
LSM2-214ENST00000493387 SASH1O94885 1247 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 TFCP2Q12800 502 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 CLASRPQ8N2M8 674 aaKnown RBP14.24□□□□□ -0.13
LSM2-214ENST00000493387 VGLL2Q8N8G2 317 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 PSMD1Q99460 953 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 EYA3Q99504 573 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
LSM2-214ENST00000493387 VPS33BQ9H267 617 aa14.24□□□□□ -0.13
LSM2-214ENST00000493387 BRCA1P38398 1863 aaKnown RBP14.24□□□□□ -0.13
LSM2-214ENST00000493387 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 GRIN3BO60391 1043 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 UFL1O94874 794 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
LSM2-214ENST00000493387 SLC5A1P13866 664 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 GPR162Q16538 588 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 HELBQ8NG08 1087 aaPredicted RBP14.23□□□□□ -0.13
LSM2-214ENST00000493387 LPIN2Q92539 896 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 WWC3Q9ULE0 1092 aa14.23□□□□□ -0.13
LSM2-214ENST00000493387 LTBP3Q9NS15 1303 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 APBB1O00213 710 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 TAF5LO75529 589 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 FGFR2P21802 821 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
LSM2-214ENST00000493387 ATP2B3Q16720 1220 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 C15orf52Q6ZUT6 534 aaKnown RBP14.22□□□□□ -0.13
LSM2-214ENST00000493387 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
LSM2-214ENST00000493387 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 COL4A1P02462 1669 aa14.22□□□□□ -0.13
LSM2-214ENST00000493387 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 TNNI3KQ59H18 835 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 OLFM4Q6UX06 510 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 TAOK3Q9H2K8 898 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 FPGT-TNNI3KV9GXZ4 949 aa14.21□□□□□ -0.13
LSM2-214ENST00000493387 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 ARFGEF1Q9Y6D6 1849 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 A0A1B0GUL7 405 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 IFIT2P09913 472 aaKnown RBP14.2□□□□□ -0.14
LSM2-214ENST00000493387 NUCB1Q02818 461 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 CAVIN4Q5BKX8 364 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 AACSQ86V21 672 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
LSM2-214ENST00000493387 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 CACNA1SQ13698 1873 aa14.2□□□□□ -0.14
LSM2-214ENST00000493387 SNED1Q8TER0 1413 aa14.19□□□□□ -0.14
LSM2-214ENST00000493387 YBX3P16989 372 aaKnown RBP eCLIP14.19□□□□□ -0.142e-9■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms