RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
MSH6-208ENST00000493177 APLP1P51693 650 aa16.79■□□□□ 0.28
MSH6-208ENST00000493177 AOC3Q16853 763 aa16.79■□□□□ 0.28
MSH6-208ENST00000493177 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
MSH6-208ENST00000493177 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
MSH6-208ENST00000493177 GNAI2P04899 355 aa16.78■□□□□ 0.28
MSH6-208ENST00000493177 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
MSH6-208ENST00000493177 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
MSH6-208ENST00000493177 H7C1W4 665 aa16.77■□□□□ 0.28
MSH6-208ENST00000493177 FZD9O00144 591 aa16.77■□□□□ 0.28
MSH6-208ENST00000493177 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
MSH6-208ENST00000493177 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
MSH6-208ENST00000493177 ZBTB40Q9NUA8 1239 aa16.77■□□□□ 0.28
MSH6-208ENST00000493177 HACL1Q9UJ83 578 aa16.77■□□□□ 0.28
MSH6-208ENST00000493177 UTYO14607 1347 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
MSH6-208ENST00000493177 GPC2Q8N158 579 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
MSH6-208ENST00000493177 LRRFIP2Q9Y608 721 aaKnown RBP16.76■□□□□ 0.27
MSH6-208ENST00000493177 POTECB2RU33 542 aa16.75■□□□□ 0.27
MSH6-208ENST00000493177 AAMPQ13685 434 aa16.75■□□□□ 0.27
MSH6-208ENST00000493177 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
MSH6-208ENST00000493177 L3MBTL3Q96JM7 780 aaPredicted RBP16.75■□□□□ 0.27
MSH6-208ENST00000493177 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
MSH6-208ENST00000493177 COL4A5P29400 1685 aa16.75■□□□□ 0.27
MSH6-208ENST00000493177 G3V3G9 751 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 CASP7P55210 303 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 CTSWP56202 376 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
MSH6-208ENST00000493177 EYA3Q99504 573 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
MSH6-208ENST00000493177 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
MSH6-208ENST00000493177 RIMBP2O15034 1052 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 EPHX2P34913 555 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
MSH6-208ENST00000493177 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 CHMP3Q9Y3E7 222 aa16.73■□□□□ 0.27
MSH6-208ENST00000493177 COL4A1P02462 1669 aa16.72■□□□□ 0.27
MSH6-208ENST00000493177 GPSM2P81274 684 aa16.72■□□□□ 0.27
MSH6-208ENST00000493177 BICC1Q9H694 974 aaKnown RBP16.72■□□□□ 0.27
MSH6-208ENST00000493177 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
MSH6-208ENST00000493177 CIAPIN1Q6FI81 312 aa16.71■□□□□ 0.27
MSH6-208ENST00000493177 PNMA8AQ86V59 439 aaPredicted RBP16.71■□□□□ 0.27
MSH6-208ENST00000493177 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
MSH6-208ENST00000493177 UFL1O94874 794 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
MSH6-208ENST00000493177 TNIP1Q15025 636 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 KAZALD1Q96I82 304 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
MSH6-208ENST00000493177 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
MSH6-208ENST00000493177 RAD17O75943 681 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 FOXO4P98177 505 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 RPAP2Q8IXW5 612 aaPredicted RBP16.69■□□□□ 0.26
MSH6-208ENST00000493177 ANKRD44Q8N8A2 993 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 PLA2G12BQ9BX93 195 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 GREM2Q9H772 168 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 LTBP1Q14766 1721 aa16.69■□□□□ 0.26
MSH6-208ENST00000493177 HTRA3P83110 453 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 CXCL9Q07325 125 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
MSH6-208ENST00000493177 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 XDHP47989 1333 aa16.68■□□□□ 0.26
MSH6-208ENST00000493177 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
MSH6-208ENST00000493177 HMMRO75330 724 aa16.67■□□□□ 0.26
MSH6-208ENST00000493177 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
MSH6-208ENST00000493177 ECE2O60344 883 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 ITGA6P23229 1130 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 EPS15P42566 896 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 SCNN1DP51172 638 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
MSH6-208ENST00000493177 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
MSH6-208ENST00000493177 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
MSH6-208ENST00000493177 RTL9Q8NET4 1388 aa16.65■□□□□ 0.26
MSH6-208ENST00000493177 ADAMTSL1Q8N6G6 1762 aa16.65■□□□□ 0.26
MSH6-208ENST00000493177 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms