RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 ABCC4O15439 1325 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 RNF123Q5XPI4 1314 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 WTIPA6NIX2 430 aaPredicted RBP10.89□□□□□ -0.67
RP9-204ENST00000492391 GRIN3BO60391 1043 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 DDX58O95786 925 aaKnown RBP10.89□□□□□ -0.67
RP9-204ENST00000492391 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
RP9-204ENST00000492391 FOXO4P98177 505 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 RASSF7Q02833 373 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 CELF1Q92879 486 aaKnown RBP10.89□□□□□ -0.67
RP9-204ENST00000492391 CRAMP1Q96RY5 1269 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 CHMP4AQ9BY43 222 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 NOB1Q9ULX3 412 aaKnown RBP10.89□□□□□ -0.67
RP9-204ENST00000492391 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
RP9-204ENST00000492391 CDHR2Q9BYE9 1310 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
RP9-204ENST00000492391 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
RP9-204ENST00000492391 ARHGAP27Q6ZUM4 889 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 UBE3BQ7Z3V4 1068 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 TTLL11Q8NHH1 800 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 NLRP3Q96P20 1036 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 SCN9AQ15858 1988 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
RP9-204ENST00000492391 UTYO14607 1347 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 ZNF646O15015 1829 aaPredicted RBP10.87□□□□□ -0.67
RP9-204ENST00000492391 CSF1RP07333 972 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 POTEJP0CG39 1038 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 PLA2G12BQ9BX93 195 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
RP9-204ENST00000492391 PTPRCP08575 1304 aa10.86□□□□□ -0.67
RP9-204ENST00000492391 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
RP9-204ENST00000492391 NPHP1O15259 732 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 PDE8AO60658 829 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 RLBP1P12271 317 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 TRIM27P14373 513 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 ALDH1B1P30837 517 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 SLC4A10Q6U841 1118 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 GREM2Q9H772 168 aa10.85□□□□□ -0.67
RP9-204ENST00000492391 PCNTO95613 3336 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 GRM8O00222 908 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 ALDH1L1O75891 902 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 YY1P25490 414 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 CTSWP56202 376 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 NEXNQ0ZGT2 675 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 ANKRD44Q8N8A2 993 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 ZNF784Q8NCA9 323 aaPredicted RBP10.84□□□□□ -0.67
RP9-204ENST00000492391 ARHGAP45Q92619 1136 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 RBM17Q96I25 401 aaKnown RBP10.84□□□□□ -0.67
RP9-204ENST00000492391 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 ATP6V0A2Q9Y487 856 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
RP9-204ENST00000492391 RTL9Q8NET4 1388 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 BBOX1O75936 387 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 SEC24BO95487 1268 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 GRAPQ13588 217 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 INTS3Q68E01 1043 aaKnown RBP10.83□□□□□ -0.68
RP9-204ENST00000492391 SP8Q8IXZ3 490 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 GRAPLQ8TC17 118 aaPredicted RBP10.83□□□□□ -0.68
RP9-204ENST00000492391 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
RP9-204ENST00000492391 PCDHB13Q9Y5F0 798 aa10.83□□□□□ -0.68
RP9-204ENST00000492391 PSME4Q14997 1843 aa10.82□□□□□ -0.68
RP9-204ENST00000492391 TTLL13PA6NNM8 815 aa10.82□□□□□ -0.68
RP9-204ENST00000492391 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
RP9-204ENST00000492391 RPS8P62241 208 aaKnown RBP10.82□□□□□ -0.68
RP9-204ENST00000492391 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
RP9-204ENST00000492391 RTFDC1Q9BY42 306 aaPredicted RBP10.82□□□□□ -0.68
RP9-204ENST00000492391 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
RP9-204ENST00000492391 POLLQ9UGP5 575 aa10.82□□□□□ -0.68
RP9-204ENST00000492391 POLR2AP24928 1970 aaKnown RBP10.81□□□□□ -0.68
RP9-204ENST00000492391 POTECB2RU33 542 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 GPSM2P81274 684 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 RABL6Q3YEC7 729 aaPredicted RBP10.81□□□□□ -0.68
RP9-204ENST00000492391 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 ATF7IPQ6VMQ6 1270 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 DDX46Q7L014 1031 aaKnown RBP10.81□□□□□ -0.68
RP9-204ENST00000492391 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
RP9-204ENST00000492391 GPR101Q96P66 508 aaPredicted RBP10.81□□□□□ -0.68
RP9-204ENST00000492391 PSMD1Q99460 953 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 MEIS3Q99687 375 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 MFRPQ9BY79 579 aa10.81□□□□□ -0.68
RP9-204ENST00000492391 SNAP23O00161 211 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 PLIN1O60240 522 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 LMNB1P20700 586 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 RFX5P48382 616 aaPredicted RBP10.8□□□□□ -0.68
RP9-204ENST00000492391 PSEN1P49768 467 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 FKBP4Q02790 459 aaKnown RBP eCLIP10.8□□□□□ -0.68
RP9-204ENST00000492391 CCDC93Q567U6 631 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 CLUAP1Q96AJ1 413 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 BICC1Q9H694 974 aaKnown RBP10.8□□□□□ -0.68
RP9-204ENST00000492391 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 IRS2Q9Y4H2 1338 aa10.8□□□□□ -0.68
RP9-204ENST00000492391 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms