RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 PALLDQ8WX93 1383 aa19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 RBM43Q6ZSC3 357 aaKnown RBP19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 ATG9AQ7Z3C6 839 aa19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 BRF1Q92994 677 aa19.08■□□□□ 0.64
SEMA4D-220ENST00000492386 TNMDQ9H2S6 317 aa19.07■□□□□ 0.64
SEMA4D-220ENST00000492386 MYH15Q9Y2K3 1946 aa19.07■□□□□ 0.64
SEMA4D-220ENST00000492386 GLIPR1L2Q4G1C9 344 aa19.07■□□□□ 0.64
SEMA4D-220ENST00000492386 PGBD1Q96JS3 809 aa19.07■□□□□ 0.64
SEMA4D-220ENST00000492386 DDX19AQ9NUU7 478 aaKnown RBP19.07■□□□□ 0.64
SEMA4D-220ENST00000492386 GOLGA6L4A6NEF3 574 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 ATF3P18847 181 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 KCNF1Q9H3M0 494 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 CLSTN2Q9H4D0 955 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 TNS3Q68CZ2 1445 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 SCRN1Q12765 414 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 CKAP2LQ8IYA6 745 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 SMARCC2Q8TAQ2 1214 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
SEMA4D-220ENST00000492386 LRRC2Q9BYS8 371 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 PFKFB2O60825 505 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 SLFNL1Q499Z3 407 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 DNTTIP2Q5QJE6 756 aaKnown RBP19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 GPR108Q9NPR9 543 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
SEMA4D-220ENST00000492386 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 GOLIM4O00461 696 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 TTLL7Q6ZT98 887 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 LUZP1Q86V48 1076 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 DDX11Q96FC9 970 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 HELLSQ9NRZ9 838 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 NR1I2O75469 434 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 TPM3P06753 285 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 ANO6Q4KMQ2 910 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 DHX32Q7L7V1 743 aaKnown RBP19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 MYRIPQ8NFW9 859 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 KIAA1524Q8TCG1 905 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 LLPHQ9BRT6 129 aaKnown RBP19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 ZSCAN16Q9H4T2 348 aaPredicted RBP19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 DCCP43146 1447 aa19.04■□□□□ 0.64
SEMA4D-220ENST00000492386 HMGB1P09429 215 aaKnown RBP19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 DSCC1Q9BVC3 393 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 CBX8Q9HC52 389 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 CWC25Q9NXE8 425 aaPredicted RBP19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 CPDO75976 1380 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 H3BQV1 296 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 TIMM10P62072 90 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 ZMYM1Q5SVZ6 1142 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 IFFO2Q5TF58 517 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 SPC24Q8NBT2 197 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 PRIMPOLQ96LW4 560 aa19.03■□□□□ 0.64
SEMA4D-220ENST00000492386 EXOSC10Q01780 885 aaKnown RBP19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 TICAM2Q86XR7 235 aa19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 MAP7D2Q96T17 732 aa19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 AGXT2Q9BYV1 514 aa19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 PYCARDQ9ULZ3 195 aa19.02■□□□□ 0.64
SEMA4D-220ENST00000492386 CTDNEP1O95476 244 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 ADD1P35611 737 aaKnown RBP19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 BICD2Q8TD16 824 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 SPEF2Q9C093 1822 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 FGD1P98174 961 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 KCPQ6ZWJ8 1503 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
SEMA4D-220ENST00000492386 A0A0G2JLW4 131 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 GOLGA6L6A8MZA4 724 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 LRRC24Q50LG9 513 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 NAA16Q6N069 864 aaPredicted RBP19■□□□□ 0.63
SEMA4D-220ENST00000492386 CFAP45Q9UL16 551 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 EYA2O00167 538 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 APOBRQ0VD83 1088 aa19■□□□□ 0.63
SEMA4D-220ENST00000492386 HSPD1P10809 573 aaKnown RBP18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 HMGN5P82970 282 aaKnown RBP18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 MAST3O60307 1309 aa18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 E7EWF7 191 aa18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 A1BGP04217 495 aa18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 TDRD7Q8NHU6 1098 aaKnown RBP18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 ZNF594Q96JF6 807 aaPredicted RBP18.99■□□□□ 0.63
SEMA4D-220ENST00000492386 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 CCDC191Q8NCU4 936 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 RNF113AO15541 343 aaKnown RBP18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 CIAO1O76071 339 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 PTGS1P23219 599 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 GTF2F1P35269 517 aaKnown RBP eCLIP18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 ZBTB3Q9H5J0 574 aa18.98■□□□□ 0.63
SEMA4D-220ENST00000492386 PCDH11XQ9BZA7 1347 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 PCDH11YQ9BZA8 1340 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 A0A1B0GUL7 405 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms