RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SCN9AQ15858 1988 aa18.85■□□□□ 0.61
SSR4-212ENST00000491833 SLC10A3P09131 477 aa18.85■□□□□ 0.61
SSR4-212ENST00000491833 HOXB7P09629 217 aa18.85■□□□□ 0.61
SSR4-212ENST00000491833 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
SSR4-212ENST00000491833 ATP5J2-PTCD1G3V325 749 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 CHL1O00533 1208 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 TBC1D16Q8TBP0 767 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 KCNQ5Q9NR82 932 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 RNF186Q9NXI6 227 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 PCDH10Q9P2E7 1040 aa18.84■□□□□ 0.61
SSR4-212ENST00000491833 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
SSR4-212ENST00000491833 ZNF609O15014 1411 aa18.83■□□□□ 0.61
SSR4-212ENST00000491833 IRS4O14654 1257 aaPredicted RBP18.83■□□□□ 0.6
SSR4-212ENST00000491833 TRPA1O75762 1119 aa18.83■□□□□ 0.6
SSR4-212ENST00000491833 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
SSR4-212ENST00000491833 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
SSR4-212ENST00000491833 ZC3H12CQ9C0D7 883 aaKnown RBP18.83■□□□□ 0.6
SSR4-212ENST00000491833 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.6
SSR4-212ENST00000491833 PSME4Q14997 1843 aa18.83■□□□□ 0.6
SSR4-212ENST00000491833 PAPPA2Q9BXP8 1791 aa18.83■□□□□ 0.6
SSR4-212ENST00000491833 G3V3G9 751 aa18.82■□□□□ 0.6
SSR4-212ENST00000491833 VIL1P09327 827 aaKnown RBP18.82■□□□□ 0.6
SSR4-212ENST00000491833 SOX10P56693 466 aa18.82■□□□□ 0.6
SSR4-212ENST00000491833 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
SSR4-212ENST00000491833 CDCA5Q96FF9 252 aa18.82■□□□□ 0.6
SSR4-212ENST00000491833 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
SSR4-212ENST00000491833 UFL1O94874 794 aa18.81■□□□□ 0.6
SSR4-212ENST00000491833 RPS8P62241 208 aaKnown RBP18.81■□□□□ 0.6
SSR4-212ENST00000491833 HYPKQ9NX55 129 aa18.81■□□□□ 0.6
SSR4-212ENST00000491833 ASTN2O75129 1339 aaPredicted RBP18.8■□□□□ 0.6
SSR4-212ENST00000491833 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
SSR4-212ENST00000491833 RALBP1Q15311 655 aa18.8■□□□□ 0.6
SSR4-212ENST00000491833 CTU1Q7Z7A3 348 aaKnown RBP18.8■□□□□ 0.6
SSR4-212ENST00000491833 RASAL3Q86YV0 1011 aa18.8■□□□□ 0.6
SSR4-212ENST00000491833 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
SSR4-212ENST00000491833 REM2Q8IYK8 340 aaPredicted RBP18.8■□□□□ 0.6
SSR4-212ENST00000491833 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
SSR4-212ENST00000491833 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
SSR4-212ENST00000491833 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
SSR4-212ENST00000491833 ANGEL2Q5VTE6 544 aaKnown RBP18.79■□□□□ 0.6
SSR4-212ENST00000491833 AGBL3Q8NEM8 1001 aa18.79■□□□□ 0.6
SSR4-212ENST00000491833 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
SSR4-212ENST00000491833 ZNF280AP59817 542 aaPredicted RBP18.78■□□□□ 0.6
SSR4-212ENST00000491833 FKBP1BP68106 108 aa18.78■□□□□ 0.6
SSR4-212ENST00000491833 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
SSR4-212ENST00000491833 RSBN1LQ6PCB5 846 aaPredicted RBP18.78■□□□□ 0.6
SSR4-212ENST00000491833 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
SSR4-212ENST00000491833 TRIM35Q9UPQ4 493 aa18.78■□□□□ 0.6
SSR4-212ENST00000491833 SCARF1Q14162 830 aa18.77■□□□□ 0.6
SSR4-212ENST00000491833 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
SSR4-212ENST00000491833 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
SSR4-212ENST00000491833 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
SSR4-212ENST00000491833 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
SSR4-212ENST00000491833 PDE4DIPQ5VU43 2346 aa18.76■□□□□ 0.59
SSR4-212ENST00000491833 CCDC152Q4G0S7 254 aa18.76■□□□□ 0.59
SSR4-212ENST00000491833 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
SSR4-212ENST00000491833 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
SSR4-212ENST00000491833 XDHP47989 1333 aa18.75■□□□□ 0.59
SSR4-212ENST00000491833 MYOZ2Q9NPC6 264 aa18.75■□□□□ 0.59
SSR4-212ENST00000491833 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
SSR4-212ENST00000491833 USP17L8P0C7I0 530 aa18.74■□□□□ 0.59
SSR4-212ENST00000491833 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSR4-212ENST00000491833 MYD88Q99836 296 aa18.74■□□□□ 0.59
SSR4-212ENST00000491833 PDE8AO60658 829 aa18.73■□□□□ 0.59
SSR4-212ENST00000491833 PCCAP05165 728 aaPredicted RBP18.73■□□□□ 0.59
SSR4-212ENST00000491833 USP17L3A6NCW0 530 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 USP17L4A6NCW7 530 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 ATP2B4P23634 1241 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
SSR4-212ENST00000491833 USP17L1Q7RTZ2 530 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 PODNQ7Z5L7 613 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 ANKRD18AQ8IVF6 992 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 GMLQ99445 158 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 HPS5Q9UPZ3 1129 aa18.72■□□□□ 0.59
SSR4-212ENST00000491833 MED23Q9ULK4 1368 aa18.71■□□□□ 0.59
SSR4-212ENST00000491833 PKN2Q16513 984 aaKnown RBP18.71■□□□□ 0.59
SSR4-212ENST00000491833 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
SSR4-212ENST00000491833 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
SSR4-212ENST00000491833 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
SSR4-212ENST00000491833 ZNF646O15015 1829 aaPredicted RBP18.7■□□□□ 0.58
SSR4-212ENST00000491833 SPEF2Q9C093 1822 aa18.7■□□□□ 0.58
SSR4-212ENST00000491833 TTLL12Q14166 644 aaPredicted RBP18.69■□□□□ 0.58
SSR4-212ENST00000491833 MOB2Q70IA6 237 aa18.69■□□□□ 0.58
SSR4-212ENST00000491833 ZNF296Q8WUU4 475 aaPredicted RBP18.69■□□□□ 0.58
SSR4-212ENST00000491833 CDC5LQ99459 802 aaKnown RBP18.69■□□□□ 0.58
SSR4-212ENST00000491833 UBE2Q2LH0YL09 131 aa18.68■□□□□ 0.58
SSR4-212ENST00000491833 NF2P35240 595 aa18.68■□□□□ 0.58
SSR4-212ENST00000491833 SCAF8Q9UPN6 1271 aaKnown RBP18.68■□□□□ 0.58
SSR4-212ENST00000491833 MYH3P11055 1940 aa18.68■□□□□ 0.58
SSR4-212ENST00000491833 MYO3BQ8WXR4 1341 aa18.68■□□□□ 0.58
SSR4-212ENST00000491833 TBC1D8O95759 1140 aa18.67■□□□□ 0.58
SSR4-212ENST00000491833 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
SSR4-212ENST00000491833 NBPF9Q3BBW0 867 aa18.67■□□□□ 0.58
SSR4-212ENST00000491833 OGFOD1Q8N543 542 aa18.67■□□□□ 0.58
SSR4-212ENST00000491833 ZNF853P0CG23 659 aa18.66■□□□□ 0.58
SSR4-212ENST00000491833 CTSWP56202 376 aa18.66■□□□□ 0.58
SSR4-212ENST00000491833 SREBF2Q12772 1141 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms